Lepeophtheirus salmonis (salmon louse): 121132617
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Entry
121132617 CDS
T08214
Symbol
U2af38
Name
(RefSeq) splicing factor U2AF 26 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121132617 (U2af38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsm03041
]
121132617 (U2af38)
Spliceosome [BR:
lsm03041
]
Complex A
U2 snRNP components
U2 related factors
121132617 (U2af38)
Complex B
121132617 (U2af38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
RRM_MUD2_C
Torus
Su_sable_N
zf_CCCH_4
DUF3973
GAPT
Motif
Other DBs
NCBI-GeneID:
121132617
NCBI-ProteinID:
XP_040583985
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All DBs
Position
2:23065398..23070291
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AA seq
239 aa
AA seq
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MAEYLASIFGTEKDKVNCSFFFKIGACRHGERCSRIHNKPTFSQTIVLNNLYINPQNSAK
SADGSHMAHVSDREMQEHYDNFFEDCFVEAEDKYGEVEEMNVCDNLGDHLVGNVYIKFRR
EEDAERAVSDLNNRWFGGRPIYAELSPVTDFREACCRQYEMGECTRSGFCNFMHLKPISR
ELRRDLYGRGSGGGGGGGNHGSRSRRSRSRSRERRHAARKEHGGRRSSPKSREGRSGRY
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatatctggcttccattttcggaacggaaaaggataaagtgaactgcagtttt
ttctttaagatcggagcttgtcggcacggagagcgctgctctagaattcataacaaaccc
acttttagtcaaactattgtgctcaacaatctctacattaatcctcagaactccgccaaa
tctgcagatggatctcatatggctcatgtatcggatcgagagatgcaggaacactacgac
aacttcttcgaggattgtttcgttgaagcggaggacaaatatggagaagtggaagaaatg
aatgtctgtgacaatttaggagatcacttggttggaaatgtgtacatcaaatttcgacga
gaggaagatgcggagcgtgcagtgtcggatctaaataatcgatggtttgggggtcgtcct
atttacgcagaactgagccctgttactgatttcagagaagcttgttgtaggcaatatgag
atgggagaatgcactcggtctggattttgcaattttatgcatttaaaaccgatttcaagg
gagttaagaagagatctctatggccgaggctctggaggaggtggcggaggtggaaatcac
ggatcacgcagtcgacgctctcgatcccgatcaagagaaaggaggcatgcagcaagaaaa
gaacatggggggagaaggtcatcccctaaaagccgtgaggggcgttcgggacggtactga
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