Lepeophtheirus salmonis (salmon louse): 121132663
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Entry
121132663 CDS
T08214
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsm03016
]
121132663
03036 Chromosome and associated proteins [BR:
lsm03036
]
121132663
Enzymes [BR:
lsm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
121132663
Transfer RNA biogenesis [BR:
lsm03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
121132663
Chromosome and associated proteins [BR:
lsm03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121132663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Chaperone_III
TARBP1
Motif
Other DBs
NCBI-GeneID:
121132663
NCBI-ProteinID:
XP_040584024
LinkDB
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Position
2:27741249..27745404
Genome browser
AA seq
1290 aa
AA seq
DB search
MPEIMESESWIKTIRDPHAADFDFINASRSLIQLSSRSHVYIPVKIIESKLESESLEMLE
VLLVLTSLVSRESDEKSREALSLQADNRLDFIKKLINLLLLDPHEKSVILKHYVDFILEE
TDFYRIKLASKYLWPHLESCNLYESLQKCGHEKVIFILFHVWKDIDPTPLYSCKWYWEYL
SECLSESLASGAIKRALYLLRESNKDNLEVKSSLWNEYVNLIESLDEKQVHIIKPVLSKL
SSFEKAFAKDLKWYFVIYRRLFKHQNLAIVHWSLNRFLTTYSIEDVGLSFFKSELIPVLN
TSKLYHSDRYTRKSVLVFFKRCTASLSLIIKEIISMRSWGPIPLYFVISSIRKTISQESK
IDIDLDTLYSIADFIIDTLTCMYPILQMAIKTDFLRIILSSTCPFPDVFSSVRGILKLFF
KMNILSPKSACVWNSVKDWIKYIPFGSEPCDATVHERVLLCLLQDDSKQYALEKFSTPLL
ESVSRPYAPPTNNFETFILYLNYTEKIISPQDVDQFSVILRRRLDKIAVVTDLFEGFSIY
LEAFHKLFDSSNQEQFIISLCKDYVDDNDIIKKYIKMSFIGSMDKRVSSVSNDICKWVRG
KFPDILLKDSRKVVNRHDQKLWGTLECNYLRSQWALLSHYCMDEEIDWISCALASIDIGG
EDVMLSIAECFVNLLNQMEEVSDFTSNIMERLLPQFKESVFHYQKNNMFKSLLDAFLNVC
FHPRMIQHLPMETASYALSLLKSSESISIIADSLGHIFHENSFIVPTEWAAFIADMLIYG
PIFRKDLALSMEVISMAMKDIETLNEDRCFPNIRVVGVKLAFLLPEKAQLIKLLWNQAIG
GELEMRKRRHFENSSTHLIRNRAAQAILILMNELSPETTHLLFLNLIEEILNEDKSRQQQ
PSVKYLMEWMLSRILISNYDNLDFYDKFHGAYCVAKRTRLTVIPSFLVVFTQLALHVPSM
KKNILDIIAPWLMGQIFATRISAQIGFNRIQPKSLKWKTLSSCLDIALFQGDEGKNKEKI
LREFYLNSFDALINWNFKDILYEFPRLCGILRQDWLTRDLKSIKNIPFHNGHSSWSFHVD
KKLCYCQECSPCTQKTRVELEIQDSEILQDVQKKIVIPIEEDKGDQAVETAHPNLILVAS
LIDKLPNLGGLCRTSEIFGIGGLVLNCIKSAEEKEFQNLSVSSQNWVKLIEVRKENLTQW
LKSMKEKEGYNLIGIEQTAQSLNLYEYMFPEKTIFVLGNEKEGVCPDVLRELDTTIEIPQ
YGVIRSFNVHVTGALVLAEYVRQRKSSINT
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaatcatggaatcagaatcatggataaaaactattcgagatcctcatgcagca
gattttgactttattaacgcatctcgatccctcattcaactctcttctcgaagtcatgtc
tatattccggttaaaatcattgagtccaagcttgaatccgagtctttggagatgctcgag
gttctattagttcttacatctcttgtatcccgggagtcggatgaaaagagtcgtgaagca
ctttctctacaagcggataatcgattggattttatcaaaaagttgatcaatctattatta
ttggatcctcatgaaaagagcgtaattttaaagcattatgtggactttatattagaggaa
acggatttttatagaataaaactagcttctaaatatttatggcctcatttggagtcttgt
aatctttatgagtcacttcaaaaatgcggccatgaaaaagttattttcatcttattccac
gtttggaaggatatagatcccacgcccctctattcttgtaaatggtactgggagtatcta
tctgaatgtttatccgaatctcttgcttctggggccattaagagagccctttatcttcta
cgggaatcgaataaagacaatttagaagttaaatcctcattatggaacgagtatgtcaat
ctgattgaatctctcgatgaaaagcaagttcatattatcaaacctgttctgagtaaactc
tcatcattcgaaaaagcatttgccaaggatttgaagtggtattttgttatataccgtcga
ttgtttaaacatcaaaatttagcgattgtgcattggagtttaaatcgttttttaacaaca
tactccattgaggacgttggactttctttcttcaagtctgaattaatccctgttttaaat
acatccaaattgtatcattctgatagatatacaaggaaatctgtactcgtattttttaaa
agatgtactgcgtctcttagtttgattattaaggaaattatttcgatgagaagttggggc
cctattcctctatattttgtcatatcttcaattagaaagactatttctcaagaatcaaag
attgatattgatttggatacattgtattctattgccgactttattattgatactctgact
tgcatgtatccaatattgcaaatggcaatcaaaacagattttctgcgtatcattttaagc
tccacttgtccatttcctgatgtattttcctccgtaaggggaattcttaaactatttttt
aagatgaatattttgtctccgaaatcagcgtgtgtttggaattcagttaaagattggata
aaatacattccttttggttcggaaccatgcgatgctactgtgcatgaaagagtcttatta
tgcctcttgcaagatgactcaaaacaatacgcattggaaaaattttctacacctctactt
gaaagtgtgtcccgaccctatgcacctccaaccaacaacttcgaaactttcattttgtat
cttaattacacagaaaagattatttctcctcaagatgttgatcaattttctgttattttg
aggagacgtttggataaaattgcggttgtgacagatttgtttgagggatttagcatatat
ctagaagcatttcacaagctttttgattccagtaatcaagaacagtttatcattagccta
tgcaaagattatgttgatgataatgacataattaagaagtatattaaaatgagttttatt
ggatcgatggataaacgtgtttcgtctgtatcgaatgatatctgcaaatgggtacgtggt
aaatttcctgatattttattgaaagactctcgaaaagttgtgaacagacatgaccaaaag
ttatggggaacattggaatgtaattatcttagaagccaatgggctttactatctcattat
tgtatggatgaggaaattgattggataagctgtgctttagcctctattgacatcggagga
gaggatgtgatgttatcaatcgctgaatgctttgttaatcttttgaatcaaatggaagag
gtcagtgattttacttcaaatattatggaacgactattacctcaatttaaggagtctgta
tttcactatcaaaaaaataacatgttcaagtccttgctcgatgcctttttaaatgtgtgc
ttccacccaaggatgatacaacacttacccatggaaactgcaagttatgcgttatcactt
ttaaagagttcagaatcaatttctattattgctgattcgcttggtcatatttttcatgag
aactcatttattgtccctactgaatgggctgcttttatagcggacatgttaatttatgga
ccaatttttcgtaaggatctagcattgagtatggaagttatttctatggcaatgaaagat
atagaaactttaaatgaagatcgatgttttccaaatattcgtgtggtgggagttaaatta
gcatttttattgccggagaaagcacaattgatcaaacttttatggaatcaagctattgga
ggtgaattagaaatgagaaaacgtaggcattttgaaaattcatcgacgcatttaattaga
aatagagctgctcaagcaatactaatccttatgaacgaactatccccagagaccacgcat
ttactttttttgaacttaatcgaggaaatcttaaatgaggacaaaagtcgtcaacaacaa
cctagtgttaagtatttaatggaatggatgttgtcccggatattaatctccaattatgac
aacttagacttttatgacaagtttcatggtgcatattgtgttgcaaagagaactcgttta
actgtcattccctcatttcttgttgtatttactcaactagcattgcatgtgcctagtatg
aagaaaaacatcctagatatcatagctccttggctcatgggtcaaatttttgctacacgt
atctccgctcaaattggttttaaccgaatccaacccaagtctctaaaatggaaaacactt
agctcttgcttagatattgcgctattccaaggggatgagggtaaaaataaagaaaaaata
ttgagggaattttatttaaattcttttgatgctctcataaattggaattttaaagatatt
ttatatgaatttcctcgtctttgtggtattttgaggcaagattggcttactagagatttg
aaatccataaagaatattccattccataacggacacagttcatggtcatttcatgtagac
aagaagttgtgttattgtcaagaatgtagtccttgcacacaaaagacgagagtagagtta
gaaatacaggactcagagattttacaggatgttcagaaaaaaattgtgattcctattgaa
gaagacaagggcgatcaagctgtagaaactgctcatcccaatttgatcctagttgcctcc
ctgattgataaactcccaaatcttggaggattatgccgtacttcagaaatatttggaatt
ggaggccttgttttgaattgtataaagtctgcagaggaaaaagaatttcaaaatttaagt
gtttcatcccaaaactgggtcaaattaattgaagtaaggaaggaaaatcttacgcaatgg
ctcaaatccatgaaagaaaaagagggatacaatcttattggtattgaacaaactgctcaa
agcctaaatctgtacgagtatatgtttcctgaaaaaacaatatttgtactcggaaatgag
aaagaaggagtttgtcctgatgttcttagagaactggatacaactattgaaatacctcag
tatggtgtcataagatcctttaatgttcatgtaacaggtgccttagtccttgctgagtat
gttcggcaaagaaaatcatccattaatacatag
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integrated database retrieval system
