Candidatus Liberibacter solanacearum: CKC_00245
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Entry
CKC_00245 CDS
T01373
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
lso
Candidatus Liberibacter solanacearum
Pathway
lso03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKC_00245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lso03400
]
CKC_00245
DNA repair and recombination proteins [BR:
lso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKC_00245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
GIY-YIG
HHH_5
HHH_2
UVR
DUF7508
Hexapep_loop
DUF6509
Motif
Other DBs
NCBI-ProteinID:
ADR51800
UniProt:
E4UBR0
LinkDB
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Position
42903..44750
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AA seq
615 aa
AA seq
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MSKQIPESPGVYQMLDAAGKVLYVGKAYNLQKRVKSYTQLNNHTHRIMCMINQTRNLNFT
TTRTEVEALLLEASMIKRLKPRFNILLRDDKSFPYIIITDEHKIPSLYKHRGPPVMKGSY
FGPFASVDAVEKTINSLQRAFFLRSCSDNIFGCRTRPCLLFQIKRCSGPCTGEISAEKYM
EFVYEAKDFLSGRNHDLKRKIAQKMNKATLEEDYESAIIHRDRLVALSHIQNHSESINET
MDCFSLYHDKNIACIQTFFFRFGQNRGSYTFFLKTDPQSTNAQIFSYFLRQFYEDKPCPE
SILLSEKAEESQLLEISFCEKYGHKVKITIPKQGEKKKIIEQALINARNSHAQKIALEIS
HQAMIKDFAEKFALPYIPKRIEIYDNSHVMGCSAVGCMVVAGESGLIKNQYRKFNLHPDD
VKTQDDCAMMRVVLERRFSQLIKNEENSNFPPKKQEYSFPSWPDVVILDGGRGQLSAAQS
VFKKLNIENRITIISIAKGQQRNAGMEKFFVENGKELMLHMRDPVLYFIQKLRDEAHRFA
VTTHRKRRKKASYNPLEEINGIGPLRKRSLLQSFGTVKMISRSSPETLASTEGISKKIAC
KIYTHFHKNTQCKST
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacaaataccggaatctcccggagtttatcaaatgttagatgccgctggaaaa
gttttatacgtaggcaaagcttacaaccttcaaaaacgagtgaaaagttatacccaatta
aacaatcatacgcatcgcattatgtgcatgattaatcaaacaaggaatttgaactttacc
acaactcgcacagaagtagaagcccttcttctagaagcaagtatgatcaaacgcttgaaa
cctcgttttaacatactattacgtgacgataaatctttcccctatattatcatcacagat
gagcataaaattccatctttgtataaacatcgaggtcctcccgtgatgaaaggaagctac
tttggcccctttgcatctgtagacgcagtagaaaaaaccattaattctctccaacgcgct
tttttcctgcgcagttgttccgacaacatattcggatgtagaacacgaccctgcttactt
ttccaaattaaacgctgctctggtccgtgtacaggagaaatcagcgcagaaaaatatatg
gaattcgtttatgaagctaaggattttctctctggacgcaaccatgatctaaagagaaaa
attgcccaaaaaatgaataaagcaacattagaagaagattatgaatcagcaattatacat
cgcgatagactagtagcgctctctcatatccaaaatcatagtgaatcaattaatgagaca
atggattgtttctcactctatcatgataaaaacattgcttgtatacagaccttctttttt
cgctttggacaaaacagaggatcctatactttctttttaaagacagatcctcaatcaact
aatgcgcaaatttttagctattttttgagacaattttacgaagacaaaccttgccctgaa
agtattttattatccgaaaaagcagaagaatctcaactactggaaatatctttttgtgaa
aaatatggacataaagtcaaaattacgattcctaagcaaggagaaaagaaaaaaattatt
gaacaagcccttataaatgcacgtaactctcatgcacaaaaaattgccttagagatatct
catcaagcaatgataaaagattttgcagaaaaatttgcattgccatatattcctaaacgc
attgaaatatatgataattcccatgttatggggtgtagtgctgttggatgtatggttgtg
gctggagaaagtggacttataaaaaaccagtaccgaaaatttaatttgcatccagatgat
gtcaaaacacaagatgattgtgctatgatgcgcgtggtattagagcggagattctctcaa
ttgattaaaaatgaagaaaattcaaatttccctcctaaaaaacaggaatattccttccct
tcttggccagatgtcgttatccttgacggaggtagagggcaactatctgcagcacaaagt
gtattcaaaaaattaaatattgagaatcgcattacgattataagtattgccaaaggacaa
caacgcaatgctggaatggaaaaattttttgtggaaaatggaaaagaactgatgttgcat
atgcgtgatcctgttctttattttattcaaaagcttcgtgatgaagcccatcgtttcgct
gttactactcatcgaaaacgtcggaaaaaagcatcttataatccacttgaagaaattaat
ggcattggacctttgcgtaaacgctcacttctccaatcatttggaacagtcaaaatgata
tctcgatcctctcctgaaacactcgcatcaacagaaggaatttcgaaaaaaatagcttgt
aaaatttacactcatttccataaaaatacccaatgtaaatctacataa
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