Candidatus Liberibacter solanacearum: CKC_00350
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Entry
CKC_00350 CDS
T01373
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lso
Candidatus Liberibacter solanacearum
Pathway
lso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKC_00350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lso03400
]
CKC_00350
Enzymes [BR:
lso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKC_00350
DNA repair and recombination proteins [BR:
lso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CKC_00350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_22
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADR51821
UniProt:
E4UBT1
LinkDB
All DBs
Position
complement(70833..73022)
Genome browser
AA seq
729 aa
AA seq
DB search
MVSSVTSSEAEVCSSVVVLLLQAVSSPYTYSVPSDMRVGLGSIVRVPLRSRTVLGVVWYD
SVYTGDNLKLRPIEYVFDCPPLSQEMCEFIKWVANYTFSSMGLVARMVVSALSETEKMEE
KIQFTGILPRINTAARLRVLNEIKDGKIWGKRNLMLASQVSSHVIDGLKEQGVVKKIFEV
ASPVVESPNPNFFLPTLDQNQKDVVEQIMPLCSTGFSVSLISGVTGSGKTEVYLEIISSV
LRLGKQVLILLPEISLASAILDRFQKRFGVKPAEWHSSLSAGMREKIWRQIAQGTISVVV
GVRSALFLPFKKLGIIVIDEEHDISYKQEDGILYNARDMSIVRGKIESFPVILVSATPSI
ESRVNGLSGRYHFFHLSTRYHNSALPHLRVIDMRDQAVERGKFLSLEMLNSIRNTLERDE
QALLFLNRRGYAPLTLCQVCGHRIKCPYCSCWLVEHRFRKKLHCHQCGYVEAYPQSCAAC
GTSGKMIACGPGVERIAEEVRDYFPLARISILSSDLDGGIKKLRLQLEAIAKGEFDIVIG
TQLVAKGHNFPRMSLVGVIDGDLGLANADLRSSERTFQLLSQVTGRAGRFGLKSIGLIQA
YQPIHPVMQALISGDADSFYESEIRARKEVGLPPFGRLAAVIVSGKKCQEVKKYACNLKE
KAPMSSDIVVFGPAEAPLFMVRGFYRFRLLIHGKRNSNLQKFFAYMYDNTPKKSNSLRVQ
FDMDPQSFL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtggtttcatcagtaacctcttcagaggcagaggtttgttctagtgttgttgtattgctt
ttacaagcagtttcttctccatatacttattcggttccttccgacatgagggtaggatta
gggtctattgtacgtgtccccctaagatcacgtactgttcttggagtagtttggtatgac
tcagtatatacaggggataatttgaaattacgccctattgaatatgtttttgattgccct
ccattgtcgcaggagatgtgtgaatttataaaatgggttgcgaattacacattttcttct
atgggattagttgcgcgtatggttgtttctgctctttcagaaacagaaaaaatggaagaa
aaaattcaatttactggaattcttcctcggattaatacggcggcgcgtcttcgtgtgctg
aatgaaattaaagatggcaaaatatggggaaaaagaaatctgatgcttgcttctcaggta
tcttctcatgtgattgatggattgaaagaacagggagttgtcaagaaaatttttgaagtg
gcgagtcctgttgtagaatcacctaacccaaatttttttttaccgacattggatcaaaat
caaaaagatgttgttgaacagattatgcctttatgttccacgggattttctgtttctctt
ataagtggtgtaacgggctctggaaaaaccgaggtttatttagagattatttcttctgtt
ttacgtttgggaaaacaggtattgattttgttgccagagatttctttggcatcggctatt
ttagatcgttttcaaaagcgttttggcgtaaaacctgccgaatggcattcttctctttct
gcaggtatgcgtgaaaaaatttggagacagatagcacaggggactatatctgtagttgtt
ggggtgagatctgctctattccttccttttaaaaaattaggtatcattgtcatagatgaa
gaacatgatatttcgtataagcaggaagatggaattttatataatgctcgcgatatgtcg
attgtgcgtgggaaaattgaatctttccctgtgattcttgtttcggctactccatccata
gagagtcgagtaaatgggttatcagggcggtatcatttttttcatttatctacaagatat
cataacagtgctttgcctcatttacgggtaattgatatgagggaccaagcggtagagcgt
gggaaatttctttcattagaaatgcttaatagtataagaaatactttggaaagagatgag
caagcgctacttttcttgaatcggagaggatatgcgccattgactttatgccaagtatgt
ggtcataggattaaatgtccttattgttcctgctggttggtagagcatcgttttagaaaa
aaattacactgtcatcaatgtggttatgttgaagcatatccgcaatcttgtgctgcgtgt
ggcacatctgggaaaatgattgcttgcggtcctggagtagagcgtattgctgaggaagtt
cgtgattattttccattggcgagaatttctattttatcttcggatttagatgggggtatt
aaaaagttgcgattgcaattagaagcgattgctaagggagaatttgatattgttattggt
acgcaattagttgcaaaagggcacaattttcctcgtatgtctttggttggggttattgac
ggtgatctcggtcttgctaatgcagatttacgatcttccgaaagaacttttcagttatta
tcacaagtaacaggtcgcgcaggacgatttggtctcaaaagtattggtttgattcaagct
tatcaaccaattcatccggtgatgcaagcgttgatttcaggagacgctgattctttctac
gaatctgaaattcgtgcaagaaaagaagttggattacctccgtttgggcgtttagccgca
gtaattgtttcagggaaaaaatgtcaagaagttaaaaaatatgcatgtaatttaaaagaa
aaggctcctatgtcgtctgatattgtggtttttgggccagcagaagcacctttgtttatg
gtgcgtggattttatcgttttcgccttttaatccatggaaagcgtaattctaatttgcaa
aaattttttgcttatatgtatgataatactcccaaaaaatcaaattcgttgcgtgtgcaa
tttgatatggatccgcaaagttttctataa
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