Candidatus Liberibacter solanacearum: CKC_00415
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Entry
CKC_00415 CDS
T01373
Name
(GenBank) NOL1/NOP2/SUN family signature protein
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
lso
Candidatus Liberibacter solanacearum
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lso03009
]
CKC_00415
Enzymes [BR:
lso01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
CKC_00415
Ribosome biogenesis [BR:
lso03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CKC_00415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Ubie_methyltran
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
Ig_GpJ_C
PCMT
TehB
MukF_C
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
ADR51834
LinkDB
All DBs
Position
86204..87493
Genome browser
AA seq
429 aa
AA seq
DB search
MRLGGQMAAAIEILKDIIFYKKPATNALKDWGASHRFAGSSDRVSISNIVYDVLRKYLSN
AYIMDDDNPDYLVYAVIIKEWNISLEDISTILREDRFAPLFPKESIIKSLHSRQLENAPL
HIQGNIPQWLQSSIQSYFKDNWLEETKSLSTRPPLDLRTNTLKVNRQKLFKNLQHHGVRY
SSISRFGLRIAATKAQSRLPNVTNEISFQRGWFEVQDEGSQIVSDLTATKQSSQILDFCA
GGGGKTLALSMLLNNKGQIHAWDKNKSRIAPIVARIKRAGIHNVQLHSNLESLRNLQEHF
TTVLVDAPCSGTGTWRRRPDIKWRLSPKNLMERIEEQKKIMQEAAKFVRLGGYLVYITCS
ILPEENIQQINNFLDNHPHFRIDSIVDNWNELYDLKNPPSLFIENGCCILTPFLTNTDGF
FFCRLKRHI
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttaggtggacaaatggcagccgctatcgaaattctcaaagatatcatcttttac
aaaaagccagcaacaaatgcattaaaagattggggcgcctctcatcgttttgctggatct
agcgatcgtgtttccattagcaatatcgtttacgatgtcttgagaaaatatctctcaaac
gcctatattatggatgatgataatccagattatttagtatacgcagtgataattaaagag
tggaatatctcccttgaagatatttctaccatactgagagaagatcgttttgcccctctt
tttccaaaagaatcaattattaaatctcttcattctcgtcaattagaaaacgccccttta
catattcaaggaaatattccgcaatggttacaatcatccatccaatcatattttaaagat
aactggctagaagaaacaaagtcgttgtctacacgccctccattagatttacgcaccaat
acactgaaagttaatcgtcaaaaattattcaagaatcttcaacatcatggcgtacgttac
tcttccatatctcgatttggacttcgcatagccgccacaaaagcacaatcacgtttgcct
aatgtcacaaatgaaatttcctttcaacgcggatggtttgaagtgcaagatgaaggatca
caaattgtttcagatctaacggcaactaagcaaagttcacaaatcctggatttttgtgct
ggaggaggaggaaaaacgctagcattatctatgctattaaataataaaggtcaaattcat
gcgtgggataaaaacaaaagtcgaatcgctcctattgtagcccgtattaaacgcgctggt
atccacaacgtacaattacacagtaatctagaatctttgcgcaatctacaggaacacttt
acgacagtattggttgacgcaccttgttctggaacaggaacatggagaaggcgccctgac
ataaaatggcggttatcgcccaaaaacctcatggaaagaattgaagaacagaaaaaaatc
atgcaggaagcggcaaaattcgtacgacttggtggttatcttgtctatattacatgctcc
attcttcccgaagaaaatattcaacaaatcaataattttttagacaatcacccccacttc
agaatcgactctatagttgataattggaacgaattatatgatctcaaaaaccccccatca
ctttttattgagaatggatgctgtattctaacgccttttttaacaaatacagatggattt
ttcttctgcaggctgaaacgtcacatttaa
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