Candidatus Liberibacter solanacearum: CKC_00780
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Entry
CKC_00780 CDS
T01373
Name
(GenBank) putative uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lso
Candidatus Liberibacter solanacearum
Pathway
lso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKC_00780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lso03400
]
CKC_00780
Enzymes [BR:
lso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CKC_00780
DNA repair and recombination proteins [BR:
lso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CKC_00780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADR51907
UniProt:
E4UC17
LinkDB
All DBs
Position
155100..155882
Genome browser
AA seq
260 aa
AA seq
DB search
MTYKRTLSQEKILNTALFYADSGVYWVFDHSNGKTHKSWGEEKPPLSSQPIKEIDQTNNP
LVEKAYSIAQNARSLHELKSLISSFHDCALQNTSSSTICATQEGGKDLMIIGYTPSDSDN
INGNPFSGKTGDILDKMLQSIGVMRIQTHTSMISPWHPPGNRQLSKIEMEICRPLIMKQI
ELVSPRILFFLGNKTINFFFNNDDKANYQNLGKWHKIQVQNRTIPTLSTVHPQELMQYPL
IKKTAWHTLITLKKALKNTL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgacttataaaagaacattatcacaagagaaaatcttaaacactgcacttttttatgca
gattctggcgtttactgggtttttgatcattccaacgggaaaacacataaatcatgggga
gaagaaaaacctcctctatcttcacagccaataaaagaaattgatcaaacaaataatcca
cttgtagaaaaagcttattctattgctcaaaacgctcgttcattacatgagctcaaatca
ctaatttcctcttttcacgattgcgctctccaaaacacatcttcttccactatttgcgcc
actcaagaaggaggaaaagaccttatgattataggttatacacctagcgatagtgacaat
ataaacggtaatcctttttctggaaaaactggagatatcttagacaaaatgctccaatct
attggcgttatgcgaatacagacacatacatctatgatttctccatggcatcctccaggc
aacagacaactttctaaaatagaaatggaaatatgtcgtcctcttataatgaaacaaatt
gaacttgtatcacctagaattctcttttttcttgggaacaaaacaataaatttttttttc
aataatgatgataaagcaaactatcaaaatcttggaaaatggcataaaattcaggtccag
aatcgtactattccaacattatctacggttcatccccaagaactaatgcaataccccctt
attaaaaaaaccgcttggcatactttgataaccctgaaaaaagcattgaaaaatactttg
taa
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