Candidatus Liberibacter solanacearum: CKC_00805
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Entry
CKC_00805 CDS
T01373
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
lso
Candidatus Liberibacter solanacearum
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lso03032
]
CKC_00805
03036 Chromosome and associated proteins [BR:
lso03036
]
CKC_00805
03400 DNA repair and recombination proteins [BR:
lso03400
]
CKC_00805
DNA replication proteins [BR:
lso03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CKC_00805
Chromosome and associated proteins [BR:
lso03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CKC_00805
DNA repair and recombination proteins [BR:
lso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CKC_00805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ADR51912
UniProt:
E4UC22
LinkDB
All DBs
Position
159515..159832
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AA seq
105 aa
AA seq
DB search
MIKSSLIYTIAKKNPQINHQDVEKMVNLLLEEMTKALANGGRVEIRGFGTFSVRKRSARL
ARAPLAQKVISVKEKMVPFFRSGKNLKECLNPRNLERDSEKVGMS
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatcttctctgatatatacaattgcaaaaaaaaatccacaaataaaccatcaa
gatgtcgaaaaaatggtaaacttattattagaagaaatgaccaaagcccttgcaaatggc
gggcgtgttgaaatacgcggctttggaactttttctgttagaaaacgctcagcaagatta
gcaagagctccactcgcccaaaaagttatatctgttaaagaaaaaatggttccttttttt
agatcaggaaaaaatctaaaagagtgtcttaacccccggaatcttgagcgtgattctgaa
aaggtaggaatgtcctga
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