Candidatus Liberibacter solanacearum: CKC_01485
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Entry
CKC_01485 CDS
T01373
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lso
Candidatus Liberibacter solanacearum
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lso03400
]
CKC_01485
Enzymes [BR:
lso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKC_01485
DNA repair and recombination proteins [BR:
lso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CKC_01485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ADR52048
UniProt:
E4UCF8
LinkDB
All DBs
Position
complement(293800..296952)
Genome browser
AA seq
1050 aa
AA seq
DB search
MENKKPNIFTIAPSSSFFREMVLSLLNGTLVESFQYDPSNPLSLASITIYVPTKRAIQAL
RSEFTAAIGEKSIILPVIKPLGDIVDENFNTDFPLSCNLNPPISNMKRLLELARLILAWR
NQFPNKIKDIYPESPLILPASPADAIWLAKNLADIIDVIEIEEKKWEDLYTLENDKYGMW
WLFALDFLKIASEYWKDRLSELSVSSAVHYQIALMRAEAEYIAKRKGTGPIIVAGSTGSM
PATARLMSAVASDPNGAIVLPGVDVFMPSNIWDTISEKSNNITQSNATHPMNPQYSLSKL
LHFLKIKREDVKCLGIVNDEMRMRSIIISKSFFPSGSFNTYDTDRMEDKILDLQKSFSDV
ALIEANNEREEATSIAIALRMSLDENKKTKSALITADRNLARRVKLELIRFGIDVDISAG
IPLSTTLQGSILTSLLNAVFKTNDPMALAVLIKHPLATFGFPEKHLFKAKNALELIALRG
NRNPCDIIDLKSLVINKINEQKNDKYIPRWQSRLSEEDKKLSLWLADHIVKSIAPLAVYK
MNENSIGDSLSTPDWTELTAACLQNVCLDENKKLPSLWLAEEGKALSALFSKIIEAGPCI
KANAIEWIDIITALIAGETVKPKIEKSSTIFILGTLESRLLNFDTLILGGLNEGIWPKYT
PKNPFLSRMMQSDLGLETAEKYIGQAAHDFEMASGTRHLIYTRSLQENNIPTVASRWLQR
LLVFGGNAFSNDLKKKGERYLDWARRLDDSTKKQIICKRPRPFPPLETQPKTYSFSEIKK
LMSDPYAIYAQKILRLDFMPRFKNDPNPKDRGILFHKIVTGLIEEKINKNTPEITRRMKD
IIDSCFEKENLPPHIDIIWRYLFHKIALPFLEYEEQRQPLIEKTIVNVPAKMKIDSIGIH
LTGIADRIDILKSGYADIIDYKTGNNPTKKIAQNLIDPQLSLEAVALKAGSFSQIDCREV
GKLVYIRLKLDHKRLKPRLIIDCIAGNEKDLSADELSEESLKNFIEIIKSLQSGKKPFIS
HLRFSENANIPSEYDHLARVEEWKENYDAS
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaaaaccaaatatttttactattgcaccatcttcttctttttttagagaa
atggtcctttctcttttaaatggaacattagtggaaagttttcaatatgatccatctaac
ccactatctttagcttcaattacaatttacgttccaacaaaacgtgcaattcaagcattg
cgttcagaatttactgcagctataggtgaaaaatctataattttaccggtaatcaaacca
ctaggggatattgtagacgaaaactttaatacggactttcccctatcgtgcaatttaaac
ccgcctatttctaatatgaaacgccttttagagctagcacgcttaattcttgcttggcgg
aatcaatttcccaacaaaataaaagatatttatcccgaatcgccgttaattcttccagcg
agtcctgctgatgctatttggctcgcaaaaaatttagcagatattatcgatgtcatcgaa
atagaagaaaaaaaatgggaagacttgtatacgctcgaaaacgataaatatggaatgtgg
tggttatttgctttggattttttaaaaattgccagcgaatattggaaagatagactttct
gaactcagcgtttcttctgccgtccattatcaaatagccctgatgcgtgctgaagcggaa
tatattgcaaaaaggaagggaacaggccctatcattgtagcaggatcaactggctccatg
ccggcaactgcacgattaatgtcagccgtggcaagtgatccaaatggtgcaatagttttg
ccaggggtagacgtttttatgcctagtaatatatgggatacaatctcagaaaaatctaat
aatattactcaatcaaatgcgacacacccaatgaatccgcaatattctttgtctaagctt
ttgcattttttgaaaataaaacgtgaagatgtcaaatgtttgggaatcgttaatgacgag
atgcgtatgcgttctattattatttcaaaatcgttttttccatcaggttcttttaataca
tacgatactgatcgtatggaagataaaatactagatcttcaaaaatctttttctgatgta
gcattaattgaggcaaataacgaacgagaagaggcaacttccatagccatagcgctacga
atgtctcttgatgaaaataaaaaaacaaaatccgccttaataaccgccgatcgaaaccta
gcgcgtcgtgtaaaactagaacttatacgttttggaatagatgttgatatttctgctggt
attcccctatcaaccacattacaaggctctattcttacatcacttttaaatgcagtcttt
aaaaccaacgatcctatggcacttgctgtgctcattaaacatcccttggcaacatttgga
tttcctgaaaaacatttgtttaaagcaaaaaatgcacttgaattaattgcgcttcgaggg
aatagaaatccttgtgatataatagatttgaaatccttggttattaataaaattaatgaa
caaaaaaatgacaaatacattcctcgttggcaatcacgcctttctgaggaagataaaaag
ttatccttatggttggcagatcatattgttaaatcgatagctcctctggctgtatataaa
atgaatgaaaattctattggcgatagtctaagtacacctgattggacagaattaacggca
gcttgtttgcaaaatgtctgtcttgatgaaaataaaaaattgccaagtttatggctggca
gaagaagggaaggctttatctgcattgttcagcaaaatcattgaagctggtccttgtata
aaagcaaacgctattgaatggattgatattattacagcactcattgccggagaaacagta
aaacctaaaatagaaaaatcatctactattttcatacttggtacgctggaatctagattg
ctgaattttgacacattaatattaggagggcttaacgaaggaatttggccaaaatatacc
cctaaaaatccgtttttatcacgcatgatgcaatcagatctaggattagaaacagctgaa
aaatacatcgggcaggctgcccatgattttgaaatggccagtgggacacgtcatcttata
tatacacgctctttacaagaaaataacattccaactgtcgcatcacgttggttacaaaga
cttttagtttttggaggcaatgctttttcaaatgatcttaaaaagaaaggggagcgctac
ttagattgggctagacgtctagacgattctaccaaaaaacaaataatttgtaagcgccca
cgccctttcccgcctctagaaacacagcctaaaacttattctttttcagaaatcaaaaaa
ctgatgtcagacccttatgctatttatgcgcaaaaaattctcaggctagattttatgccc
cgttttaaaaacgatcccaatccaaaggatcgcggaattctttttcataagattgtcaca
gggctcatagaagaaaaaataaataaaaatacacctgaaataactcgtcgtatgaaagat
attattgattcttgctttgaaaaagaaaatttacctccgcatattgacattatttggcgt
tatctatttcataaaattgctcttcctttcttagaatatgaagaacaacgacagccttta
atagaaaaaacaattgttaatgttcctgcaaaaatgaaaatagattctatcggaattcat
ctaactggtattgctgatcgtattgatatactaaaatcaggatatgcggacataatagac
tataaaaccggtaataatcctacaaaaaaaattgctcaaaatcttattgatccacaactt
tcattagaagcggtggctttgaaagctggatctttttctcaaattgactgtagagaagtt
gggaaacttgtgtacataagattaaagctagatcacaaaagactcaagccaagacttata
atcgattgcattgcaggaaatgaaaaagatctttccgctgacgaactttcagaagaatcc
ctaaagaattttattgaaattataaaatccttacaaagtggcaagaagccttttatatca
catttacgcttctcagaaaacgccaatattcctagcgagtatgatcatcttgcccgagtg
gaagaatggaaagaaaactatgatgcatcttaa
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