Candidatus Liberibacter solanacearum: CKC_02110
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Entry
CKC_02110 CDS
T01373
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lso
Candidatus Liberibacter solanacearum
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lso03016
]
CKC_02110
Enzymes [BR:
lso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CKC_02110
Transfer RNA biogenesis [BR:
lso03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CKC_02110
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
DUF7469
Glyco_hydro_95_cat
Motif
Other DBs
NCBI-ProteinID:
ADR52173
UniProt:
E4UCT3
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All DBs
Position
452063..452692
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AA seq
209 aa
AA seq
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MTTIRVHNGDIPTECIARYTGPIAVDTETLGLIPRRDRLCVVQLSPGDGTADIIRIAAEQ
KNAPNLVTMLANETQEKIFHYARFDIAVLFYTFGVRVKPIFCTKIASRLTRTYIDRHGLK
DNLRELLGVDISKKQQLSDWSEDDLSHEQLQYAASDVVHLHALREKFIAKLQSLGRSDVA
SACFNFLMSRAELDLLGWDNIDIFSHGSD
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgacaactatacgtgtgcataatggggatattcccactgaatgtattgcaagatatact
ggccctattgccgttgatacggaaacgcttggtctgattccacgtcgagatcgtctgtgt
gttgtgcagttatctccaggagatgggaccgctgatattattcggattgctgctgaacaa
aaaaatgcgcctaatcttgtaacaatgcttgcaaatgaaacgcaagaaaaaatttttcat
tatgctcgctttgatatagcagtattattttatacttttggagtaagggtaaaaccaatt
ttttgtacaaagattgcttcacggttgactagaacttatatagatcgtcatgggttgaag
gataatttgagagaattgttaggggtggatatatcgaaaaaacaacaattatctgactgg
agtgaggatgatttatctcatgaacagctccaatacgctgcttcggatgtagtgcatttg
catgcactgcgtgagaaattcatagcaaaacttcaaagtctagggcgttcagacgttgct
tcagcttgttttaattttttaatgagtagggccgaattagatctattaggctgggataat
attgatattttttcacacggctcagattag
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