Candidatus Liberibacter solanacearum: CKC_03025
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Entry
CKC_03025 CDS
T01373
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lso
Candidatus Liberibacter solanacearum
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CKC_03025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lso03019
]
CKC_03025
03009 Ribosome biogenesis [BR:
lso03009
]
CKC_03025
03036 Chromosome and associated proteins [BR:
lso03036
]
CKC_03025
Enzymes [BR:
lso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CKC_03025
Messenger RNA biogenesis [BR:
lso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CKC_03025
Ribosome biogenesis [BR:
lso03009
]
Eukaryotic type
90S particles
RNase
CKC_03025
Prokaryotic type
rRNA processing factors
CKC_03025
Chromosome and associated proteins [BR:
lso03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CKC_03025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Lact_bio_phlase
Motif
Other DBs
NCBI-ProteinID:
ADR52354
UniProt:
E4UDB4
LinkDB
All DBs
Position
646050..646748
Genome browser
AA seq
232 aa
AA seq
DB search
MQNFVNLSLKLSALERRIGYTFSNKYLLKKALTHSSICHSPQENYERLEFLGDRVLGILI
SKLLFDYFDSAKEGELSIRFNSLVSAETCSQVAKELELDSFIYVSSDLRMEVCKFVKGIQ
ADVVESLIAALYLDGGIESASSFVTKYWKKRVLKNGEFRRDAKTELQEWAHAKFRVTPTY
KIMLRSGPDHDPRFTVMVDVLGLYSGKGIDCSKRSAEQMAAAEILRREGIWS
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaattttgtgaatttatcattaaaactttcagctttagaaagacgaataggttat
actttttcgaacaagtatttgttgaaaaaggcattgactcattcaagcatttgtcattct
ccgcaagaaaattatgaaagattagaatttcttggtgatcgcgttcttggtattttaata
tcaaaactattatttgattattttgattctgctaaagaaggagagctttctattcgcttt
aattcccttgtgagtgcagaaacttgttctcaagttgcaaaggaactagagttggattct
tttatatatgtgagttctgatctgaggatggaggtttgtaaatttgtaaaaggcattcaa
gctgatgttgtagaaagtttgatcgctgcgttgtatcttgatggtggaattgaatctgcc
agttcttttgtaacaaaatactggaaaaagcgcgttcttaaaaatggagaatttcgtcgt
gatgctaagactgaattacaagagtgggcacatgcaaaatttagagttactccaacatat
aaaattatgttgcgttcaggaccagatcatgatccacgcttcacagtgatggttgatgtt
ttgggtctttattctggcaaaggaatcgattgttcaaaacgttctgcagaacaaatggct
gctgcagaaattctgaggcgtgagggaatttggagttga
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