Candidatus Liberibacter solanacearum: CKC_03690
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Entry
CKC_03690 CDS
T01373
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lso
Candidatus Liberibacter solanacearum
Pathway
lso03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CKC_03690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lso03400
]
CKC_03690
DNA repair and recombination proteins [BR:
lso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CKC_03690
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CKC_03690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
T2SSE
AAA_19
SWI2_SNF2
Microtub_bd
SRP54
AAA_7
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
ADR52487
UniProt:
E4UBI1
LinkDB
All DBs
Position
774049..776502
Genome browser
AA seq
817 aa
AA seq
DB search
MSKKKIFSIKKPSHIESTRSSFTDDQDYLSFEKKQFYADKEIVANTMRQIRSEAGKHRKN
VAKRINKEKSLHNSDPKSSKIALQSKKPTTQDKKRTALNNIPKKEIAENAMTPSVQALAR
LIQSDNPLFKNGKIWTPHRSLSIHNHPKKISPFQMHTDYQPSGDQPSAISQIVESIHAEE
KIQLLLGVTGSGKTFTMAKVIEAMQRPAIVMAPNKILAAQLYSEFKNFFPNNAVEYFVSY
YDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCIYGIGSVE
SYSQMILKIKIGDQIEQKELLSSLVKQQYKRQDMGIVRGSFRVCGDSIEIFPSHLENTAW
RISMFGNDIEEIAEFDPLTGQKNRNLEEIKIYANSHYVTPRPTLNAAMKCIKEELNVRLI
ELEKEGRLLESQRLAQRITYDLEMLETTGSCQSIENYSRYLTGRNPGEPPPTLFEYISEN
ALLFVDESHVTIPQISGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDCLRPTTIVV
SATPGAWELEKCQGMIVEQIIRPTGLVDPPVEIRSARTQVEDIKEEINLTIQNGLRILLT
VLTKRMAEDLTEYLYEHNIRVRYMHSEVHTLERIEIIRDLRLGKFDVLVGINLLREGLDI
PECGLVAILDADKEGFLRSRTSLIQTIGRAARNVDSKVILYADTMTKSIKLAIDETTRRR
EKQQEYNRKNNIKPESVKEKIIEVIDPILQENNSKSEITINTEQLPQSKKERELHLKSLR
KQMLIAADNMNFEEAARIRDEIKRLKNAFSYDTLDSS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaaaaaaattttttctatcaagaaaccttcacacatagagtcaactcgttct
tcttttacagatgatcaggattatctttcttttgaaaaaaaacaattttacgcagataaa
gaaattgttgccaatacgatgcgtcaaattcgttctgaagctggaaaacatcgcaaaaat
gtagcgaaacgcataaataaagagaaatcacttcataattctgatcccaaatcatcaaaa
attgcattgcaatcgaagaaacctactacacaagataagaaaagaacggcattaaataat
attcctaaaaaagaaattgctgaaaatgcaatgactccatcagtgcaagcgcttgcacgt
ttaatacaatcagataatccacttttcaaaaacggaaaaatttggactccgcatcgttct
ttatcgatccacaatcatccaaagaaaatctctccatttcagatgcacacagactaccaa
ccttctggagatcagccatctgctatttctcaaatcgtagaaagcattcatgcagaagaa
aaaatccagcttttgcttggagtgaccggatcaggcaaaacttttaccatggcaaaagtt
attgaagcaatgcaacgacctgctattgtgatggcacccaataaaattttagccgcacaa
ctttattcagagtttaaaaattttttccccaataacgcagttgaatatttcgtttcttat
tatgattattatcaaccagaagcatatgttccacgtacagatacttatattgaaaaagaa
tcttctattaacgagcaaatcgatcgtatgcgccactctgctactcgttctctcttagaa
cgcaatgattgcattgtcgtttcttcggtatcttgtatctatggtataggatcagttgaa
tcttattcacaaatgattttaaaaataaaaataggagatcaaatagaacaaaaagaatta
ctttcttctttggtcaaacaacaatataagcgacaagatatggggattgtacgaggatct
tttcgggtttgtggcgattcaattgaaatttttccttctcatcttgaaaacactgcatgg
cgcattagcatgtttggcaatgatattgaagaaattgctgaatttgatcctcttacgggt
caaaagaatagaaatttagaagaaattaaaatatatgctaattcccattatgtcacacca
agacctactcttaatgcagccatgaaatgcattaaagaagaactaaatgttcgtcttatt
gaattagaaaaagaaggaagattgcttgaatctcaacggcttgcacaacggataacttac
gatttagaaatgctagaaacaacaggatcttgccagtctattgaaaattattctcgctat
ctaaccggacgtaatcctggcgaaccccctcctactctttttgaatatatttcggaaaat
gccttattatttgttgatgaaagtcatgttactattcctcaaattagtggcatgtatcga
ggtgattttcgccgtaaagcaactttagcagaatatggttttcgccttccttcttgtatg
gataatcgtccattgcgttttgaagaatgggattgcttacgtccaactactattgtcgtt
tcagccactcccggagcatgggaattagaaaaatgtcaaggaatgattgttgaacaaatt
attcgtccgaccggacttgttgatcctccggtagagattcgatctgctcgaacacaagta
gaggatattaaggaagaaataaacctaacgattcagaatggtttacgcattttattaaca
gttctcacgaaacggatggcagaagacttaaccgaatatctttatgaacataatattcgt
gtacgctacatgcattccgaagtacataccttggaacgcattgaaatcatacgtgatctt
cgtcttggaaaatttgatgttcttgtcggaattaatctgctccgcgaaggattggatatt
cctgaatgtggtcttgtcgctattcttgatgcagataaagaaggttttttacgctctaga
acatctttgatccaaacgattgggcgcgcggcacgtaacgtcgatagtaaagtgattctt
tatgccgatacgatgaccaaatccattaaattagctattgacgagacaactagaagacgc
gagaaacagcaagaatataataggaaaaataatatcaaaccagagtcagtaaaagaaaaa
atcattgaagtcattgatcccattctacaagaaaataactccaaatccgagatcacaatc
aataccgaacagttgcctcaatccaaaaaggaacgagaattacatttaaaatcactacgt
aaacaaatgctcatcgcagctgacaatatgaattttgaagaagcagctcgcatccgtgat
gaaatcaaaagattaaaaaatgcattttcctatgatactcttgattcttcttaa
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