Candidatus Liberibacter solanacearum: CKC_05175
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Entry
CKC_05175 CDS
T01373
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lso
Candidatus Liberibacter solanacearum
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lso03032
]
CKC_05175
03400 DNA repair and recombination proteins [BR:
lso03400
]
CKC_05175
Enzymes [BR:
lso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CKC_05175
DNA replication proteins [BR:
lso03032
]
Prokaryotic type
DNA Topoisomerases
CKC_05175
DNA repair and recombination proteins [BR:
lso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CKC_05175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ADR52781
UniProt:
E4UDV3
LinkDB
All DBs
Position
complement(1105040..1107769)
Genome browser
AA seq
909 aa
AA seq
DB search
MTEHIVPNDEEGEKGITSVSIVEEMQNSYLTYAINVILGRAIPDLRDGLKSVHRRILFGM
MQMGVEWNKKYVKCARISGEVMGKYHPHGNAAIYDALARMAQDWSLRLLLIEGQGNFGSI
DGDPPAAERYTECRLQKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCAKFPNLLVNGAG
GIAVGMATNIPTHNLGEVIEGCIALIDNPDIDLDDMMKIILGPDFPTGAIILGRSGIRSA
YATGRGSIVIRGVTHIEKTEGDREKIIVTEIPYQVNKSAMLEKIAELVREKRIVDISDLR
DESDRQGYRVVIELKRGASADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIEILKN
FIAFREEVVGRRTKYLLNKARDRAHVLVGLAIAVSNLDEVVRIIRFSPNPESARRELMQR
NWNAVDIKDLIDLIDDSSYTINSDGKMYLSEVQTRAILELRLARLTGLGRDDIRDELNSL
GTEIKDCLEILSSRSRLLNIIKQELKFIKDELDTPRRTEIVDGLLDMEDEDCIVREDMVV
TVSHFGYVKRVPLSLYRAQRRGGKGRSGVVTRNEDFVTDLFIVNTHTPVLFFSSLGFVYK
EKVWRLPIGSPQSRGKALINILSLQQGERITTIMPLPEDESSCSDLYVVFATKLGNVRRN
KLSDFVQVNRSGKIAMKLDEGDEILSVETCMEGNDVLLTTKLGQCIRFAITDVRVFSGRN
SVGVRGIVLAEDDQVISMAIVLHADADYDERVCYMKYMASHRRLIASDIDEGGVLKNDSS
IEGKISEERCKELKSKEQFILTVSEKGFGKRTSSYDFRISSRGGKGILATDTSKMDEIGP
LISAFPVNDKDQIILVSDKGTLIRVPVNDIRIASRSTKGVVIFSTAKDERVVSVERISES
DIIDVSEEE
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgagcatattgtacccaatgatgaagagggtgagaagggcataacttctgtttcg
atagttgaggaaatgcaaaattcttaccttacctatgcaataaatgtcattttaggccgt
gctatacctgatttgcgagatggtttaaaatctgtccatcgtcgtatactttttggtatg
atgcagatgggggtagagtggaataagaaatatgtgaagtgtgcgcgtatttctggagaa
gtgatgggtaaataccatccacacggtaatgctgcgatttacgatgctttggcacgtatg
gcacaggattggtcattgcgtttattgttgattgaagggcaggggaatttcggctcaatt
gatggagatcctccggcagcggaaaggtatactgaatgtcgtttgcaaaaagcggcacat
tttttgctggatgatctgggcaaagatacagttgattttcgtcctaactatgatggttct
tttcaagagcctgttgttctttgtgctaaatttcctaacttacttgtaaatggtgctggt
ggtatagccgttggtatggcgacgaatattcccacccataatttgggagaggtgattgag
ggttgtatagctttaattgataatcctgatattgatcttgatgatatgatgaagattatt
cttggtccagattttccgacaggggctatcattttagggcgttctggaattagaagtgct
tatgcaacaggtcgaggatctatcgtaatacgaggcgttactcacatagaaaaaacagaa
ggtgatcgagaaaagattatcgttactgagatcccgtatcaggtaaataaatcagcaatg
ctggaaaagattgctgagttagttagagaaaagcgtatagtagatatatcagatctgcga
gacgaatcagatcgtcaaggttatagagtagtcattgagttgaagcgaggtgcttctgct
gatgttattttaaaccaattgtaccgctatacttctttacaaagtttgttcagcgtcaat
atggttgctttgaatggatataaacctgagcgatttaccctgatagaaatcctcaaaaat
tttattgcttttcgtgaagaagttgtaggcagaagaacaaaatatcttttgaacaaggca
cgtgatagggctcatgttttagttggtcttgctattgctgtttctaatttagatgaagtg
gtgcgtattattcgtttttctccaaatccagaatctgctcgacgagagctgatgcagaga
aattggaatgctgtagatattaaagatttgatcgatcttattgatgattccagctatact
ataaatagtgatggaaagatgtatctatcagaagttcaaacgagagcgattttagaactt
cgtttagcacgactgacggggttaggacgagacgatattcgcgatgaattgaatagtctt
ggtacagaaattaaggattgcttagagatactatcatcacgatcccgtttgttgaatatt
atcaaacaagaattgaaatttattaaagatgaacttgatactcctcgtcggacagagatt
gtagatggtttgttggatatggaagacgaagattgtattgtgcgagaagatatggttgtg
acggtttcgcattttggatatgtcaagcgtgttccactttctttatatcgagcacagcgt
cgcggtgggaaagggcgttctggcgtagtaacacgtaatgaagattttgtaacggatttg
tttatcgtgaatacacatacaccagttttgtttttttcgtctttaggattcgtttataag
gaaaaagtatggcgtttgcctattggatcccctcaatctcgtggaaaggctttaattaat
attctttctctgcaacagggagaacgcattacgacgattatgcctcttccagaagatgaa
tcgagttgtagtgatttatatgttgtgtttgctactaaacttggaaatgttcggcgtaat
aagctctctgattttgttcaggtaaatcgtagtggtaaaattgctatgaaattagatgaa
ggggatgagattctttctgttgaaacctgtatggagggaaatgacgtattactaactact
aagttagggcaatgtattcgatttgcaattactgatgtgcgagttttttcagggcgtaat
tcagtgggggtaaggggaatagttcttgcagaagatgatcaggtgatctctatggcgatt
gttctccatgctgatgcagattatgatgagcgcgtttgttatatgaagtatatggcttct
catcgtcgtcttattgcaagtgatattgatgaaggtggtgttcttaaaaatgattcttct
attgaagggaagatttcggaagagcgttgtaaagaattaaagtcaaaagaacaatttatc
ttgaccgtatcagaaaaaggatttggcaaaagaacatcttcttatgattttcgtatttcc
agtcgtggcgggaaaggtattcttgctactgatacttcaaaaatggatgaaataggacca
ttgatatcagcatttcccgttaatgataaggatcaaatcatactagtttctgataaagga
actcttattcgagttcctgttaatgatattagaattgctagccgttctacaaagggagtt
gttattttttctactgcgaaggatgagagagtggtatcagttgagcgtattagtgaatct
gatattattgatgtgtcagaagaagaataa
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