Lysobacter soli: GOY17_00020
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Entry
GOY17_00020 CDS
T06337
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lsol
Lysobacter soli
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsol03032
]
GOY17_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
lsol03400
]
GOY17_00020 (gyrB)
Enzymes [BR:
lsol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GOY17_00020 (gyrB)
DNA replication proteins [BR:
lsol03032
]
Prokaryotic type
DNA Topoisomerases
GOY17_00020 (gyrB)
DNA repair and recombination proteins [BR:
lsol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GOY17_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QGW63448
LinkDB
All DBs
Position
4047..6512
Genome browser
AA seq
821 aa
AA seq
DB search
MTHIEHDPSQDPSVASTPAVPQTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVF
EVVDNSVDEALAGHADDIVVTIHVDGSVSVLDNGRGMPVDIHKEEGVSAAEVILTVLHAG
GKFDDNSYKVSGGLHGVGVSVVNALSEHLWLDVWRDGFHHHQEYALGEPVAPLKQLEASD
KRGTRLRFKPSASIFTDIEFHYDILARRLRELSFLNSGVKITLVDERGEGKRDVFQYAGG
IRSFVEHLAQLKNPLHPNVISVSGEQNGITVDVALQWTDAYQETMFCFTNNIPQKDGGTH
LAGFRAALTRTMSNYIEQNGIAKQAKISLSGDDMREGMIAVLSVKVPDPSFSSQTKEKLV
SSDVKPVVEATFGARLEEFLQEHPQEARAICEKVVDAARAREAARKARDLTRRKGALDIA
GLPGKLADCQEKDPALSELFIVEGDSAGGSAKQGRNRKTQAILPLKGKILNVERARFDRM
LGSAEVGTLITALGTGIGKDEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPEL
IERGHVYIGLPPLYKIKQGKNELYLKDDAALDAYLANNAVEGASLVPATGEPAIEGAALE
KLLLAYASAREAIGRNAHRYDPSVIEALIDSIPLDAAALADHTALRREFDALEARLNRGG
LGKPRYTLELHEGAGQPALLVKRLHMGEELTQVLPLSIFEAGELRTVREAAAQLHGLIRE
GAQIVRGNRAQPIDSFAQAQTWLLEEAKKGRQIQRFKGLGEMNPEQLWDTTVNPETRRLL
QVRIEDAVAADQIFSTLMGDVVEPRREFIEDNALKVANLDV
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgacccacatcgagcacgatccctcgcaagatccgtccgtcgcttcgacccccgccgtt
ccccagacctacgactccagcaagatcaccgtgctgcgtggtctggaagccgtgcgcaag
cgtccgggcatgtacatcggcgacgtgcacgacggcaccggcctgcaccacatggtgttc
gaagtcgtcgacaactcggtcgacgaagccctggcggggcatgccgacgacatcgtggtg
acgatccacgtggacggctcggtctccgtgctggataacggccgcggcatgccggtggac
atccacaaggaagaaggcgtctcagcggccgaggtgatcctcaccgtgctgcacgccggc
ggcaagttcgacgacaacagctacaaggtttccggcggcctgcacggcgtgggcgtctcg
gtggtcaatgcgctgtcggagcacctgtggctcgacgtgtggcgcgacggcttccaccat
caccaggaatatgcgctgggcgagcccgtggctccgctcaagcagctggaagcttccgac
aagcgcggcacgcgcctgcgcttcaagccgtccgcgtcgatcttcaccgacatcgagttc
cactacgacatcctcgcgcgtcgtctgcgcgagctgtcgttcctcaattcgggcgtgaag
atcacgctggtcgacgagcgcggcgaaggcaagcgcgatgtcttccagtacgccggtggc
atccgctcgttcgtcgagcacctggcgcagctgaagaatccgctgcaccccaacgtcatt
tcggtgtcgggcgaacagaacggcatcacggtggacgtcgccctgcagtggaccgacgcc
taccaggaaacgatgttctgcttcaccaacaacatcccgcagaaggacggcggtacgcac
ctggccggcttccgcgctgccctgacgcgcacgatgtccaactacatcgagcagaacggc
atcgccaagcaggccaagatcagcctgtcgggcgacgacatgcgcgaaggcatgatcgcc
gtgctgtcggtgaaggtgcccgaccccagcttctcttcgcagaccaaggaaaagctggtc
agctccgacgtgaagccggtggtcgaagcgaccttcggtgcgcgcctggaagagttcctg
caggaacacccccaggaagcccgcgcgatctgcgagaaggtcgtcgatgccgcgcgcgcg
cgcgaagccgcccgcaaggcgcgcgatctcacgcgccgcaagggcgcgctcgacatcgcg
ggcctgccaggcaagctcgccgactgccaggagaaggatccggcgctctccgaactgttc
atcgtcgagggtgactcggcaggtggctcggccaagcagggccgcaaccgcaagacgcag
gcgatccttccgctcaagggcaagatcctcaacgtcgagcgcgcgcgtttcgatcgcatg
ctcggcagcgccgaagtcggcacgcttatcaccgcgctgggcaccggcatcggcaaggac
gagtacaacccggacaagctgcgctaccaccgcatcatcctgatgaccgacgcggacgtc
gacggaagccacatccgcacgctgctgctgaccttcttctaccggcagatgccggagctg
atcgagcgcggccacgtctacatcggcctgccgccgctgtacaagatcaagcagggcaag
aacgagctgtacctcaaggacgacgcggcgctcgacgcgtacctggcgaacaacgccgtg
gaaggcgcctcgctcgtgccggccacgggcgagccggcgatcgaaggcgccgcgctggag
aagctgctgcttgcctacgcgagcgcacgcgaggccatcggccgcaacgcgcatcggtac
gatccgagtgtcatcgaagcgctgatcgattcgatcccgctcgatgccgccgcgctggct
gaccacaccgcgctgcgtcgcgagttcgatgcgttggaggcgcgcctcaatcgtggcggc
ctcggcaagccgcgctacacgctggaactgcacgaaggtgccggtcagcccgcgctgctg
gtcaagcgcctgcacatgggcgaggaactcacccaggtgctgccgctgtcgatcttcgaa
gccggcgaactgcgcaccgtgcgtgaagccgccgcgcagctgcatggcctgatccgcgaa
ggcgcgcagatcgtgcgcggcaatcgcgcgcagcccatcgacagcttcgcgcaggcgcag
acctggttgctggaagaagccaagaagggccgccagatccagcgcttcaagggcctgggc
gaaatgaaccccgagcagctctgggacacgacggtgaacccggagacccgccgcctgctg
caggtgcggatcgaggacgcggttgccgccgaccagatcttcagcacgctgatgggcgac
gtcgtcgaaccgcgccgcgagttcatcgaagacaacgcgctcaaggtcgccaacctcgac
gtgtga
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