Lysobacter soli: GOY17_00280
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Entry
GOY17_00280 CDS
T06337
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lsol
Lysobacter soli
Pathway
lsol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GOY17_00280 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsol03400
]
GOY17_00280 (recD)
Enzymes [BR:
lsol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GOY17_00280 (recD)
DNA repair and recombination proteins [BR:
lsol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GOY17_00280 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
UvrD-helicase
Helicase_RecD
SH3_13
AAA_22
UvrD_C
T2SSE
DEAD
NTPase_1
AAA_24
SLFN-g3_helicase
nSTAND3
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QGW63493
LinkDB
All DBs
Position
61298..63115
Genome browser
AA seq
605 aa
AA seq
DB search
MSLLDALLRQGALRPVDHALAQSLRRLGREVDDADDRVLVAAALASSAIAHGHAGLDLSR
PQLVCDAEVEWPDAAQWRDALEASRWVASPSREDASPQAPLVLEGDLLYLRRYREYERRL
ALHLRRIAASSPDAGDLSALAPLFAALFPNAGASDRQARAAALALLRSLLLVTGGPGTGK
TTTITRVLLLLVAQAALDGRPAPRIALAAPTGRAAERMAESLRAAIASLRDVAGIDAAWC
DALPSSASTLHRLLGTIPDSPRFRHDADHPLPYDAIVVDEASMVDLPLMCKLVEAVPDGA
RLILLGDRDQLPSVEAGDVLAAITDAAGEGDALPPDLARALKPLLGALPERDDVSVLAGH
RVQLQRGYRQAQSLELAPLADALRTGDADRATTLLRDGLAGVHFHEDVSDPLSGASREPL
LASWRASMSLQDPADALRQAQTVRLLTALREGAQGAAALNQRIEDALAGVQRDPYFHGRL
LLITENSYRHGLFNGDIGVVQRDAAGVPVAWFAGSDGVRGFHPASLPAHTGAFAMTVHKA
QGSEFDTVWLLLPKQDARTLSRELLYTGVTRARRELHVCASEAVLHAALARHAQRVSGLA
SRLRD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctcgatgcactgctgcgccaaggcgcgctgcgaccggtcgatcatgcgctg
gcgcagagcctgcgacgtcttggccgcgaggttgacgacgccgacgatcgcgtgctcgtt
gctgcggcgctcgcgtcgtcggcgatcgcacacggacacgcggggctggatctgtcgcga
ccgcagctggtctgcgacgcggaggtcgaatggcccgacgcggcgcaatggcgcgacgcg
ctggaggcctctcgctgggtcgcatcgccttcgcgcgaggatgcgagcccgcaggcgccg
ctggtgctcgaaggcgacctgctgtacctgcgccgctatcgcgagtacgaacgtcgcctt
gcattgcacctgcgacgcatcgcggcatcgtcgccggatgctggcgatctgtccgcgttg
gcgccgttgttcgccgcgttgttccccaatgccggcgcgtcggaccgccaggcgcgtgcc
gccgcgctcgcacttctgcgctcgttgctgctggtgaccggcggtcccggcaccggcaaa
acgacgacgatcacgcgcgtgttgctgcttctcgtcgcgcaggcggcgctcgatggccgg
ccggcaccgcgcatcgcgctcgccgcgccgaccggtcgcgccgccgagcgcatggccgaa
agcctgcgcgcggcgatcgcctcgttgcgcgacgtggcgggcattgacgcggcatggtgc
gacgcgctgccgtcgtcggcgagcacgctgcatcgcctgctcggcacgattcccgacagc
ccgcgattccgccacgatgccgatcatccgctgccttacgacgcgatcgtggtcgacgaa
gcatcgatggtcgatcttccgttgatgtgcaagctggtcgaagccgtgcccgatggcgcg
cggctgatcctgctcggcgatcgtgaccagctgccgtcggtggaagccggcgacgtgctc
gccgcgatcaccgacgcggcgggcgaaggcgacgcgttgccccccgatctcgcgcgcgcg
ctgaagccgctgctcggcgcattgcccgagcgcgatgatgtcagcgtgctcgccggccat
cgcgtgcaactgcagcgtggttatcggcaggcgcaatcgctggagctcgcgccgctggcc
gatgcgctgcgcacgggcgacgccgatcgcgcgacgacactgctgcgcgatggcctcgcg
ggtgtgcatttccatgaggacgtgtcggatccgctgtccggtgcatcacgcgaaccactg
ctcgcgtcgtggcgcgcgtcgatgtcgctgcaggatccggccgacgccttgcgacaggcg
cagacggtgcgcctgctcaccgcgctgcgcgaaggcgcgcagggcgcggcggcgctgaac
cagcgcatcgaggatgcgcttgccggcgtgcagcgcgatccatacttccatggtcgattg
ttgctgatcaccgagaacagctatcgacacggcctgttcaacggcgacatcggcgtggtg
cagcgcgatgctgcgggcgttccggtggcgtggttcgccggctccgatggcgtgcgcggc
tttcatccggcctcgctgccagcgcataccggtgcgttcgcgatgaccgtgcacaaggcg
cagggatcggagttcgataccgtctggttgctgctgccgaagcaggacgcccgcacgctg
tcgcgcgagctgctctatacgggcgtcacgcgcgcgcgtcgcgaattgcatgtctgcgcg
agcgaagcggtgctgcatgccgcgctggcgcgtcatgcgcagcgcgtgtcggggctggcg
agtcgcttgcgggattga
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