Lysobacter soli: GOY17_01215
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Entry
GOY17_01215 CDS
T06337
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsol
Lysobacter soli
Pathway
lsol03420
Nucleotide excision repair
lsol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GOY17_01215 (uvrD)
03430 Mismatch repair
GOY17_01215 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsol03400
]
GOY17_01215 (uvrD)
Enzymes [BR:
lsol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GOY17_01215 (uvrD)
DNA repair and recombination proteins [BR:
lsol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GOY17_01215 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GOY17_01215 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QGW63661
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All DBs
Position
279173..281365
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AA seq
730 aa
AA seq
DB search
MDVSHLLDALNPAQREAVSAPPGHYLVLAGAGSGKTRVLTHRIAWMNEVHGVPTHGILAV
TFTNKAAGEMRHRVDGQLRHGARGMWIGTFHGLAHRLLRLHWQEAKLPEGFQVLDSDDQL
RLVKRVVQALEFDETRFPPRQIVWWINAQKDEGRRPHNLQPTSGDPWADVMHKCYEAYQE
RCERAGLVDFAELLLRAHELLRDNPALLAHYRHRFREILVDEFQDTNAIQYAFVRVLAGD
TGHVFVVGDDDQSIYGWRGAKVENMQRFLKDFSGTHTIRLEQNYRSSANILEAANAVIAH
NPDRLGKNLWTDSGTGEPIDLYAAYNEMDEARFVVERLRQWVRDGGSYGEVAILYRSNAQ
SRAFEESLLSEQVPYRVYGGLRFFERAEIKDTLAYLRLIASRLDDAAFERAVNTPTRGIG
ERTLDEVRRRARADGVSLWEASRRIVGENGLAARARNAVAGFLAMIDDLDNELASMTLPE
KIDHVLIRSGLREHYFNESRGQLDSRVDNLDELVSVASRFTRSDDEDAAAMPELVAFLSY
AALEAGEGQAQAGEEGVQLMTLHSAKGLEFPLVFLAGMEEGVFPSGRSTEESGRLEEERR
LAYVGITRARQKLVLSYAESRRIHGADMYGVPSRFLREIPAPLLNEVRPKVQVSRPYSGG
VQRGVLGASRGHAPLEQPAVRLGSQVKHPSFGMGTVTDYEGSGAHARVQVNFDDAGSKWL
VLAYANLQPA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacctgctcgacgcgctgaatccagcgcagcgcgaggccgtcagcgcc
ccgcccggtcattacctcgtcctcgccggcgccggttccggcaagacccgcgtgctcacg
caccgcatcgcctggatgaacgaagtccacggcgtgccgacccacggcatcctcgcggtg
accttcaccaacaaggccgccggcgagatgcgccaccgcgtcgacggccagctgcgccac
ggcgcgcgcggcatgtggatcggcaccttccacggactcgcgcatcgcctgctgcgcctg
cactggcaggaagcgaagttgcccgaaggcttccaggtgctcgattcggacgaccagctg
cgcctggtcaagcgcgtcgtgcaggcgctggaattcgacgaaacgcgctttccgccgcga
cagatcgtgtggtggatcaacgcgcagaaggacgaaggccgccgcccgcacaacctgcaa
ccgacgtccggcgatccgtgggccgatgtcatgcacaaatgctacgaggcctaccaggag
cgctgcgaacgcgcgggcctggtcgatttcgccgagctcctgctgcgcgcgcacgaactg
ctgcgcgacaacccggcgctgctggcgcattaccggcatcgcttccgcgagatccttgtc
gacgagttccaggacaccaacgcgatccagtacgcgttcgtgcgcgtgctcgcgggcgac
accgggcacgtgttcgtcgtcggcgacgacgaccagtcgatctacggctggcgcggcgcg
aaagtcgagaacatgcagcggttcctgaaggatttctccggcacgcacacgatccggctg
gagcagaactaccgctccagcgcgaacatcctggaagcggcgaacgcggtcatcgcgcac
aacccggatcggctgggcaagaacctctggaccgacagcggcacgggcgagccgatcgac
ctgtacgccgcgtacaacgagatggacgaggcgcgcttcgtcgtcgaacgcctgcgccag
tgggtgcgcgacggcggcagctatggcgaagtcgccatcctctaccgcagcaacgcgcaa
tcgcgcgcgttcgaagagtcgctgctgtccgaacaggtgccgtaccgtgtgtacggtggc
ctgcgcttcttcgagcgagccgaaatcaaggacacgctggcgtacctgcgcctcatcgcc
tcgcgcctggacgacgccgccttcgagcgcgcggtgaatacgcccacgcgcggcatcggc
gagcgcacgcttgacgaagtgcggcgccgcgcgcgtgccgatggcgtgtcgctgtgggag
gcgtcgcgtcggatcgtcggcgagaacggcctggcggctcgcgcgcgcaatgcagtcgcg
ggcttcctcgcgatgatcgacgacctcgacaacgaactggcgtcgatgacgctgccggag
aagatcgaccacgtgttgatccgctcgggccttcgcgagcattacttcaacgaatcgcgc
ggccagctggattcgcgcgtggacaacctcgacgaactggtctccgtcgcttcgcgcttc
acgcgcagcgacgacgaggacgcggcggcgatgccggaactggtggccttcctcagctac
gccgcgcttgaagccggcgaaggccaggcgcaggccggcgaggaaggcgtgcagctgatg
acgctgcacagcgcgaaggggctggaattcccgctggtgttcctcgccggcatggaagag
ggcgtgttcccgagcggtcgctccacggaagagtccggtcgcctcgaagaggagcggcgc
ctggcgtacgtcggcatcacgcgcgcgcggcagaagctcgtgctcagctatgccgaatcg
cgccgcatccacggcgcggacatgtacggcgtgccgtcgcgcttcctgcgcgagatcccg
gcgccgctgctcaacgaagtgcgtccgaaggtgcaggtctcgcgcccgtacagcggcggc
gtgcaacgcggcgtgctgggcgccagtcgcggccacgcgccgctggagcagccggcggtg
cggttgggctcgcaggtgaagcatccgtcgttcggcatgggaaccgtgaccgattacgaa
ggcagcggcgcgcacgcccgcgtgcaggtgaacttcgacgatgccggcagcaagtggctg
gtgctggcgtatgcgaatctgcagccggcgtga
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