Lysobacter soli: GOY17_05595
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Entry
GOY17_05595 CDS
T06337
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
lsol
Lysobacter soli
Pathway
lsol00541
Biosynthesis of various nucleotide sugars
lsol01100
Metabolic pathways
lsol01250
Biosynthesis of nucleotide sugars
Module
lsol_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GOY17_05595 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lsol01005
]
GOY17_05595 (kdsA)
Enzymes [BR:
lsol01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
GOY17_05595 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
lsol01005
]
Lipid A
GOY17_05595 (kdsA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
QGW64436
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Position
1203019..1203852
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AA seq
277 aa
AA seq
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MNLCGFEVGLDQPFFLIAGPCVIESMQLQLDTAGKLKEITSELGINFIFKSSFDKANRTS
ATSFRGPGLEEGLKVLAEVKKQIGVPVLTDVHEYTPMDEVAAVVDVLQTPAFLCRQTNFI
QNVARAGKPVNIKKGQFLSPWEMKHVTDKAKATGNTQIMACERGVSFGYNNLVSDMRSLS
VMRDTGCPVVFDATHSVQLPGGAGGKSGGQREFVPVLSRAAMAVGIDGIFMETHPVPDEA
LSDGPNAWPLPKMRALLETLLEIDRITKKNGFLESTV
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcggattcgaagtcggcttggaccaacccttcttcctgatcgccggcccc
tgcgtgatcgagtcgatgcagctccagctcgataccgccggcaagctcaaggaaatcacc
tccgagctcggcatcaacttcatcttcaagtcgagcttcgacaaggccaaccgcacctcc
gccaccagcttccgcggccccggcctcgaggaaggcctgaaggtgctggccgaggtgaag
aagcagatcggcgtgccggtgctgaccgacgtgcatgaatacacgccgatggacgaggtc
gcggccgtcgtcgacgtgctgcagacgccggcgttcctctgccgccagacgaacttcatc
cagaacgtcgcccgcgccggcaagccggtgaacatcaagaagggccagttcctctccccg
tgggaaatgaagcacgtcaccgacaaggccaaggccaccggcaacacgcagatcatggcg
tgcgagcgcggcgtgtcgttcggctacaacaacctggtgagcgacatgcgctcgctgagc
gtgatgcgcgacaccggctgcccggtggttttcgacgccacgcattcggtgcagctgccc
ggcggtgccggcggcaagagcggcggccagcgcgaattcgtgccggtgctgtcgcgcgcg
gcgatggcggtcggcatcgacggcatcttcatggagacccatccggtgccggacgaagcg
ctgtcggacggcccgaacgcgtggccgctgccgaagatgcgcgcgctgctggaaacgctg
ctggaaatcgaccggatcaccaagaagaacggtttcctcgaatccacggtctga
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