Lysobacter soli: GOY17_06415
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Entry
GOY17_06415 CDS
T06337
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lsol
Lysobacter soli
Pathway
lsol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GOY17_06415 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsol03400
]
GOY17_06415 (uvrA)
DNA repair and recombination proteins [BR:
lsol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GOY17_06415 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GOY17_06415 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_23
AAA_16
nSTAND1
RsgA_GTPase
AAA_25
AAA_21
nSTAND3
Viral_helicase1
cobW
DnaJ_CXXCXGXG
zf_C2H2_10
Motif
Other DBs
NCBI-ProteinID:
QGW64586
LinkDB
All DBs
Position
complement(1394932..1397922)
Genome browser
AA seq
996 aa
AA seq
DB search
MALDYIRIRGARTHNLKNIDLDLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLSVMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTP
RCPDHGYPLEAQTVSQMVDQVVALGETEAGREQRYMLLAPVIRERKGEHAQVFEQLRAQG
FVRVRVDGVLHEIDAVPPLALRVKHTIEAVVDRFKPRDDIKQRLAESFETALKLGDGMAQ
VMSLDDADAAPLLFSSKYSCPVCEYSLPELEPRLFSFNSPVGACPTCDGLGVAQFFDPSR
VVVHPELSLSAGAVRGWDRRNAYYFQLIQSLARHYKFDVDAPWQSLPKKARDAVLFGSGD
ETISFTYLTEAGGRSQRKHRFEGIVPNLERRYRETESAAVREELAKYISERACTDCGGAR
LNRAARSVFVDECPLPDIVVMPVDEALSFFKALNLPGWRGEIAVKIVKEIADRLRFLVDV
GLDYLTLERKADSLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTR
LRDLGNTVIVVEHDEDAIRLADYVVDIGPGAGVHGGEVIAHGTLDDLLKSPRSLTGQYLS
GKRGIEVPTRRHKPDAKTTFHLRGATGNNLKDVDLAIPSGLFTAITGVSGSGKSTLINDT
LFAITANELNGASHTAAPYREYENIELWDKVVDIDQSPIGRTPRSNPATYTGLFTPLREL
YAQVPEARARGYSPGRFSFNVRGGRCEACQGDGLIKVEMHFLPDVYVPCDVCGGKRYNRE
TLEILYKGYNINDVLEMTVEDALNLFENIPAISRKLETLMDVGLSYIKLGQSATTLSGGE
AQRVKLSKELSRRDTGRTLYILDEPTTGLHFHDIEHLLTVLHRLRDDGNTVVVIEHNLDV
IKTADWVIDLGPEGGHRGGTILACGTPEEIAALPHSHTGRFLAPLLQAKPEASARKAKPA
AAKAGGKAASKTATAKTAATRTAADKKNNTKKKSAA
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggattacatccgcatccgcggcgcgcggacgcacaacctcaagaacatcgac
ctcgacctcccccgcgacaagctcatcgtgatcacggggctgtcgggatcgggcaagtcc
tcgctcgcgttcgacacgatctacgccgaaggccagcgtcgctacgtcgagtcgctgtcg
gcctacgcgcgccagttcctctccgtgatggagaagccggacgtcgaccacatcgaaggt
ctctcgccggcgatctcgatcgaacagaagtcgacctcgcacaacccgcgatccaccgtc
ggcacgatcaccgagatctacgactacctgcgcctgctctacgcacgcgtgggcacgccg
cgctgccctgaccacggttacccgctggaagcgcagacggtcagccagatggtcgaccag
gtcgtcgcgcttggcgaaaccgaagccggccgcgaacaacgctacatgctgctggcgccg
gtgatccgcgagcgcaagggcgagcacgcgcaggtgttcgaacagctgcgcgcgcagggc
ttcgtgcgcgtgcgcgtggacggcgtgctgcacgagatcgatgccgtgccgccgctcgcg
ctgcgcgtgaagcacaccatcgaagcggtcgtggaccgcttcaagccgcgcgacgacatc
aagcagcgtctggccgaatcgttcgagaccgcgctcaagctcggcgacggcatggcgcag
gtcatgtcgctcgacgacgccgacgcggcgccgctgctgttctcgtccaagtacagctgc
ccggtgtgcgaatactcgctgccggagctggaaccgcgcctgttctcgttcaactcgccg
gtgggcgcgtgcccgacgtgcgacggcctgggcgtggcgcagttcttcgatccctcgcgc
gtggtcgtgcatccggagctgtcgctctcggccggcgccgtgcgtggctgggaccgtcgc
aacgcctattacttccagctgatccagtcgctggcgcgccactacaagttcgacgtcgat
gcgccgtggcagtcgttgccgaagaaggcacgcgacgcggtgctgttcggcagcggcgat
gaaaccatcagcttcacctacctcaccgaagccggtggccgcagccagcgcaagcatcgc
ttcgaaggcatcgtgccgaacctggaacgtcgctaccgcgagaccgaatcggccgccgtg
cgcgaggaactggccaagtacatcagcgagcgcgcctgcaccgattgcggcggcgcgcgc
ctgaaccgcgccgcgcgcagcgtgttcgtcgacgagtgtccgctgccggacatcgtcgtg
atgccggtggacgaggcgctgtcgttcttcaaggcgctcaacctgcccggttggcgcggc
gagatcgccgtcaagatcgtcaaggaaatcgccgaccgcctgcgcttcctcgtcgatgtt
ggcctcgactacctcacgcttgagcgcaaggccgattcgctctcgggcggtgaagcgcag
cgcatccgcctggcgtcgcagatcggcgccggcctggtcggcgtgatgtacgtgctcgac
gagccgtccatcggcctgcaccagcgcgacaacgaacgcctgctcggcacgctcacgcga
ctgcgcgacctcggcaacaccgtcatcgtggtcgaacacgacgaggacgcgatccgcctg
gccgattacgtcgtcgacatcggtcccggcgccggcgtgcacggcggcgaagtgatcgcg
cacggcacgctggacgacctgctcaagtcgccgcgttcgctcaccggccagtacctgtcc
ggcaagcgcggcatcgaagtgccgacgcgtcgccacaagcccgacgcgaagaccaccttc
cacctgcgcggcgccaccggcaacaacctcaaggacgtcgacctggcgatcccgtcgggg
ctgttcacggcgatcaccggcgtatccggctcgggcaagtcgacgctgatcaacgacacg
ctgttcgcgatcaccgccaacgagctcaatggcgcctcgcatacggcggcgccgtatcgc
gagtacgagaacatcgagctgtgggacaaggtcgtcgacatcgatcagtcgccgatcggc
cgcacgccgcgttcgaacccggccacgtacaccggcctgttcacgccgctgcgcgagctg
tacgcgcaggtgcccgaagcgcgtgcgcgcggctattcgccgggccgcttcagcttcaac
gtgcgcggcggccgctgcgaggcctgccagggcgacggcctgatcaaggtcgagatgcac
ttcctgcccgacgtgtacgtgccgtgcgacgtctgcggcggcaagcgctacaaccgcgag
acgctggagatcctctacaagggttacaacatcaacgacgtgctggagatgaccgtcgag
gatgcgctgaacctgttcgagaacatcccggcgatctcgcgcaagctcgaaacgctgatg
gacgtgggcctgagctacatcaagctgggccagagcgcgacgacgctgtccggcggcgag
gcgcagcgcgtgaagctgtcgaaggaactctcgcggcgcgacaccggccgcacgctgtac
atcctcgacgagccgaccacgggcctgcacttccacgacatcgaacatctgctgaccgtg
ctgcatcgcctgcgcgacgacggcaacacggtggtggtgatcgagcacaacctcgacgtc
atcaagacggcggactgggtgatcgacctgggtccggaaggcggccaccgtggcggtacg
atcctggcctgcggcacgccggaagaaatcgccgcgctgccgcattcgcacaccggccgc
ttcctcgcgccgctgctgcaggccaagccggaggcgtccgcgcgcaaggccaagccggcc
gcagccaaggccggcggcaaggccgcctcgaagacggcaacggcgaagaccgcggcgacc
aggacggccgccgacaagaagaacaacacgaagaagaagtccgccgcatga
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