Lysobacter soli: GOY17_07205
Help
Entry
GOY17_07205 CDS
T06337
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lsol
Lysobacter soli
Pathway
lsol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GOY17_07205 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsol03019
]
GOY17_07205 (pnp)
03016 Transfer RNA biogenesis [BR:
lsol03016
]
GOY17_07205 (pnp)
Enzymes [BR:
lsol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GOY17_07205 (pnp)
Messenger RNA biogenesis [BR:
lsol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GOY17_07205 (pnp)
Transfer RNA biogenesis [BR:
lsol03016
]
Prokaryotic type
tRNA degradation factors
GOY17_07205 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_2
KH_5
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QGW64722
LinkDB
All DBs
Position
1576222..1578330
Genome browser
AA seq
702 aa
AA seq
DB search
MAKITKTFQYGDHQVTLETGEIARQASGAVIVKMDDTVVLVSAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRPTEKETLISRLIDRPIRPLFPEEYKNEVQIIATVMSLN
PEIDGDIPALIGASAALALAGTPFQGPIGAAKVGYKNGQYILNPTATQLADSDLELVVAG
TSNAVLMVESEAKMLSEDVMLGAVMFGHREMQKVINAINELTVEAGTKPSTWVAPAKNDA
LIAAIVESAGASLKQAYQIRNKAERRDAISAIRKDTWEQLSGRAEASGWTAGEYAKEFGD
LEYRTMRDSVLDTKIRIDGRDLTTVRPIECKTGVLPRTHGSALFTRGETQAIVVTTLGTA
RDGQIIDAVSGEYKENFLFHYNFPPYSVGETGRFGAPKRREIGHGRLAKRGVLATMPTLE
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKSPVAGIAMGLVKEDDRFVVLS
DILGDEDHLGDMDFKVAGSQEGISALQMDIKIQGITEEIMKVALAQAKEGRLHILGEMAK
AITAPRSELSEYAPRLLTMKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAAAAQAAKARIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSERV
EKVSDKLKEGDTVKVKVLEVDKQGRIRLSMKAVEEGEGVPAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaagaccttccagtacggcgatcaccaggtgacgctggagaccggc
gaaattgctcgccaggctagcggcgccgtcatcgtcaagatggacgacaccgtcgtgctg
gtgtctgccgtcgccgccaagagcgcgcgcgaagggcaggacttcttcccgctcacggtg
gactaccaggagaagttctacgccggtggccgcatcccgggtggcttcttcaagcgcgaa
ggccgtccgaccgagaaggaaacgctgatctcgcgtctcatcgaccgcccgatccgcccg
ctgttccccgaggaatacaagaacgaagtccagatcatcgcgacggtgatgtcgctgaat
ccggaaatcgacggcgacattccggcgctgatcggcgcctcggccgcgctggcgctggcc
ggcacgccgttccagggcccgatcggtgccgccaaggtcggttacaagaacggccagtac
atcctcaacccgaccgccacgcagctggccgactcggaccttgagctggtcgtagcgggt
acgtccaacgccgtgctgatggtcgaatccgaagcgaagatgctgtcggaagacgtgatg
ctcggcgcggtgatgttcggtcaccgcgagatgcagaaggtcatcaacgccatcaacgag
ctgaccgtggaagccggcaccaagccgtcgacctgggttgccccggcgaagaacgacgcg
ctgatcgctgccatcgtcgaatcggccggcgcttcgctgaagcaggcctaccagatccgc
aacaaggccgagcgccgcgacgccatctcggccatccgcaaggacacctgggaacagctg
tcgggccgcgccgaagcttcgggctggacggctggcgagtacgccaaggagttcggcgat
cttgaataccgcaccatgcgcgactcggtgctcgacaccaagatccgcatcgacggtcgc
gacctgaccaccgtgcgtccgatcgaatgcaagaccggcgtgctgccgcgtacccacggc
tcggcgctgttcacccgcggcgagacgcaggccatcgtggtcaccacgctgggcaccgcg
cgcgacggccagatcatcgatgccgtctcgggcgagtacaaggaaaacttcctgttccat
tacaacttcccgccgtactcggtgggcgagaccggccgcttcggcgcgccgaagcgtcgc
gagatcggccacggccgcctcgccaagcgcggtgtgctcgccacgatgccgacgctggaa
gagttcccgtacacgatccgcgtcgtgtcggaaatcaccgaatcgaacggttcctcgtcg
atggcctcggtctgcggttcctcgctcgcgctgatggacgccggcgtgccggtgaagtcg
ccggtcgcgggcatcgcgatgggcctggtgaaggaagacgaccgcttcgtcgtgctgtcg
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtggccggttcgcag
gaaggcatcagcgccctgcagatggacatcaagatccagggcatcaccgaagagatcatg
aaggtcgccctcgcccaggcgaaggaaggccgcctgcacatcctcggcgagatggccaag
gccatcaccgcgccgcgcagcgagctgagcgagtacgcgccgcgcctgctgacgatgaag
atccacccggacaagatccgcgaagtgatcggcaagggcggttcgaccatccaggcgatc
accaaggaaaccggcacgcagatcgacatccaggacgacggcaccatcgtcatcgcgtcg
gtgaatgccgccgctgcgcaggccgccaaggcgcgcatcgagcagatcacctccgacgtc
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggtgcgttcgtg
acgatcctgccgggcaaggacggcctggtgcacgtctcgcagatctcgagcgagcgcgtg
gagaaggtctccgacaagctgaaggaaggcgacacggtcaaggtgaaggtgctggaagtc
gacaagcagggccgcatccgcctgtcgatgaaagccgtcgaggaaggcgagggcgttccg
gccgagtaa
DBGET
integrated database retrieval system