KEGG   Lysobacter soli: GOY17_07205
Entry
GOY17_07205       CDS       T06337                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
lsol  Lysobacter soli
Pathway
lsol03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lsol00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GOY17_07205 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsol03019]
    GOY17_07205 (pnp)
   03016 Transfer RNA biogenesis [BR:lsol03016]
    GOY17_07205 (pnp)
Enzymes [BR:lsol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     GOY17_07205 (pnp)
Messenger RNA biogenesis [BR:lsol03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     GOY17_07205 (pnp)
Transfer RNA biogenesis [BR:lsol03016]
 Prokaryotic type
  tRNA degradation factors
   GOY17_07205 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 S1_RRP5 KH_2 OB_RRP5_4th KH-I_KHDC4-BBP S1_2 KH_5 KH_KhpA-B
Other DBs
NCBI-ProteinID: QGW64722
LinkDB
Position
1576222..1578330
AA seq 702 aa
MAKITKTFQYGDHQVTLETGEIARQASGAVIVKMDDTVVLVSAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRPTEKETLISRLIDRPIRPLFPEEYKNEVQIIATVMSLN
PEIDGDIPALIGASAALALAGTPFQGPIGAAKVGYKNGQYILNPTATQLADSDLELVVAG
TSNAVLMVESEAKMLSEDVMLGAVMFGHREMQKVINAINELTVEAGTKPSTWVAPAKNDA
LIAAIVESAGASLKQAYQIRNKAERRDAISAIRKDTWEQLSGRAEASGWTAGEYAKEFGD
LEYRTMRDSVLDTKIRIDGRDLTTVRPIECKTGVLPRTHGSALFTRGETQAIVVTTLGTA
RDGQIIDAVSGEYKENFLFHYNFPPYSVGETGRFGAPKRREIGHGRLAKRGVLATMPTLE
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKSPVAGIAMGLVKEDDRFVVLS
DILGDEDHLGDMDFKVAGSQEGISALQMDIKIQGITEEIMKVALAQAKEGRLHILGEMAK
AITAPRSELSEYAPRLLTMKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAAAAQAAKARIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSERV
EKVSDKLKEGDTVKVKVLEVDKQGRIRLSMKAVEEGEGVPAE
NT seq 2109 nt   +upstreamnt  +downstreamnt
gtggcaaaaatcaccaagaccttccagtacggcgatcaccaggtgacgctggagaccggc
gaaattgctcgccaggctagcggcgccgtcatcgtcaagatggacgacaccgtcgtgctg
gtgtctgccgtcgccgccaagagcgcgcgcgaagggcaggacttcttcccgctcacggtg
gactaccaggagaagttctacgccggtggccgcatcccgggtggcttcttcaagcgcgaa
ggccgtccgaccgagaaggaaacgctgatctcgcgtctcatcgaccgcccgatccgcccg
ctgttccccgaggaatacaagaacgaagtccagatcatcgcgacggtgatgtcgctgaat
ccggaaatcgacggcgacattccggcgctgatcggcgcctcggccgcgctggcgctggcc
ggcacgccgttccagggcccgatcggtgccgccaaggtcggttacaagaacggccagtac
atcctcaacccgaccgccacgcagctggccgactcggaccttgagctggtcgtagcgggt
acgtccaacgccgtgctgatggtcgaatccgaagcgaagatgctgtcggaagacgtgatg
ctcggcgcggtgatgttcggtcaccgcgagatgcagaaggtcatcaacgccatcaacgag
ctgaccgtggaagccggcaccaagccgtcgacctgggttgccccggcgaagaacgacgcg
ctgatcgctgccatcgtcgaatcggccggcgcttcgctgaagcaggcctaccagatccgc
aacaaggccgagcgccgcgacgccatctcggccatccgcaaggacacctgggaacagctg
tcgggccgcgccgaagcttcgggctggacggctggcgagtacgccaaggagttcggcgat
cttgaataccgcaccatgcgcgactcggtgctcgacaccaagatccgcatcgacggtcgc
gacctgaccaccgtgcgtccgatcgaatgcaagaccggcgtgctgccgcgtacccacggc
tcggcgctgttcacccgcggcgagacgcaggccatcgtggtcaccacgctgggcaccgcg
cgcgacggccagatcatcgatgccgtctcgggcgagtacaaggaaaacttcctgttccat
tacaacttcccgccgtactcggtgggcgagaccggccgcttcggcgcgccgaagcgtcgc
gagatcggccacggccgcctcgccaagcgcggtgtgctcgccacgatgccgacgctggaa
gagttcccgtacacgatccgcgtcgtgtcggaaatcaccgaatcgaacggttcctcgtcg
atggcctcggtctgcggttcctcgctcgcgctgatggacgccggcgtgccggtgaagtcg
ccggtcgcgggcatcgcgatgggcctggtgaaggaagacgaccgcttcgtcgtgctgtcg
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtggccggttcgcag
gaaggcatcagcgccctgcagatggacatcaagatccagggcatcaccgaagagatcatg
aaggtcgccctcgcccaggcgaaggaaggccgcctgcacatcctcggcgagatggccaag
gccatcaccgcgccgcgcagcgagctgagcgagtacgcgccgcgcctgctgacgatgaag
atccacccggacaagatccgcgaagtgatcggcaagggcggttcgaccatccaggcgatc
accaaggaaaccggcacgcagatcgacatccaggacgacggcaccatcgtcatcgcgtcg
gtgaatgccgccgctgcgcaggccgccaaggcgcgcatcgagcagatcacctccgacgtc
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggtgcgttcgtg
acgatcctgccgggcaaggacggcctggtgcacgtctcgcagatctcgagcgagcgcgtg
gagaaggtctccgacaagctgaaggaaggcgacacggtcaaggtgaaggtgctggaagtc
gacaagcagggccgcatccgcctgtcgatgaaagccgtcgaggaaggcgagggcgttccg
gccgagtaa

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