Lysobacter soli: GOY17_08600
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Entry
GOY17_08600 CDS
T06337
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K03701
excinuclease ABC subunit A
Organism
lsol
Lysobacter soli
Pathway
lsol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GOY17_08600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsol03400
]
GOY17_08600
DNA repair and recombination proteins [BR:
lsol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GOY17_08600
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GOY17_08600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
DnaJ_CXXCXGXG
AAA_29
AAA_16
AAA_21
DUF4350
DUF2752
Motif
Other DBs
NCBI-ProteinID:
QGW64970
LinkDB
All DBs
Position
1902764..1905388
Genome browser
AA seq
874 aa
AA seq
DB search
MARRDRDTHGTDAFVRVRGAREHNLREVDVDIPRDALVVFSGVSGSGKSSLAFGTLYAEA
QRRYLESLSPYARRLIDQVGVPDVDAIEGLPPAVALQQQRGTPNVRSTVGSITTLSSLLR
MLYSRAGTYPPKQPMLFAEDFSPNTPQGACPNCHGLGSVYDVTEQSMVPDPSLSIRDRAI
ASWPPAWHGQNLRDILVTLGYDVDVPWSQLPKKDRDWILFTEETPTVPVYPGFTPAQTRT
ALKRKTEPAYMGTFTGARRYVLHTFATTQSALMKKRVSRFMTGAPCPVCGGRRLKREALS
VTFAGLDIGTLSQLSLDRIAQTLKPAAEGHFEASTNTRTRSRAASRKDVETRVASGGSAH
AGSSDVRRTPDLSEEKRIAAQRIAHDLIERIGALQALGLGYLALDRPTPTLSPGELQRLR
LATQIRSNLFGVVYVLDEPSAGLHPADSEALYDALDQLKGTGNTLFVVEHDLDLMQRADW
LVDVGPGAGQHGGKVLYSGPPKGLANVESSMTRRYLFDAHAVRRTPRTPTRWLELRGVHR
NNLHGVDARFPIGAFTSVTGVSGSGKSSLVSQALVELVGDHLGHEPAVEEGEGDAPSMGP
IVRTVGRLGAGSDAIRRLVNVDQKPIGRTPRSNLATYTGLFDHVRKLFAATKTAKSRRYS
AGRFSFNVAQGRCETCEGEGFVSVELLFMPSVYAPCPTCHGSRYNAKTLEVEWNGRNIAQ
VLAMTVDEARTFFKAESVVERPLTLLHEIGLGYLRLGQPATELSGGEAQRIKLASELQRS
QRGDTLYVLDEPTTGLHAADVDKLMAQLHGLVDAGNTVVVIEHEMRVVADSDWVIDMGPG
AGEEGGRIVAAGTPDEVSRAKDSRTAPYLRKSLG
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggccagacgcgaccgcgacacccatggcaccgacgccttcgtgcgtgttcgcggcgca
cgcgaacacaacctgcgcgaggtcgacgtcgacataccccgtgacgcgctggtggtgttt
tcgggcgtatcgggctcgggcaagtcgtcgctggccttcggcacgctgtacgccgaggcg
cagcggcgttacctcgaatcgctgtcgccgtacgcgcggcgcctgatcgaccaggtcggc
gtgcccgacgtggatgccatcgaaggcctgccgccggccgtcgcgctgcaacagcagcgt
ggtaccccgaacgtgcgctcgaccgtgggcagcatcacgacgctgtcgagcctgcttcgc
atgctgtactcgcgcgccggcacgtatccgccgaagcagccgatgctgttcgcggaggat
ttctcgcccaacacgccgcagggcgcgtgtccgaactgccacggcctgggcagcgtgtac
gacgtcaccgagcagtcgatggtgcccgatccctcgctcagcatccgcgaccgggcgatc
gcgtcctggccgccggcgtggcatgggcagaacctgcgcgacatcctggtgacgctcggc
tacgacgtcgatgtcccgtggtcgcagctgccgaagaaggaccgcgactggatcctcttc
accgaggaaacgccgacggtgccggtgtatcccggcttcacgcccgcgcagacgcgcacg
gcgctcaagcgcaagaccgagccggcgtacatgggcaccttcaccggcgcgcgtcgctac
gtgctgcacaccttcgcgaccacgcagagtgcgctgatgaagaagcgcgtgtcgcgcttc
atgaccggcgcgccgtgcccggtgtgcggcggacgacgcctcaagcgcgaggcgctgtcg
gtgaccttcgccggcctggacatcggcacgctgtcgcagctgtcgctcgatcgcatcgcg
cagaccttgaagcccgccgcggaaggccacttcgaggcgtcgacgaatacgcgcacgcgc
agtcgcgcggcgagccggaaggatgtcgaaacgcgcgtcgcatcgggaggctcggcgcat
gccggaagctccgacgtacgccgcacgcccgatctgtccgaggaaaagcgcatcgccgcg
cagcgcatcgcgcacgacctcatcgaacgcatcggcgcactgcaggcattggggctcggc
taccttgcgctggatcgaccgacgccgacgctgtcgcccggcgagctgcagcggctgcgt
ctggcgacgcagatccgctcgaacctgttcggcgtggtgtacgtgctcgacgaaccgtcg
gccgggctgcatccggccgacagcgaggcgctgtacgacgcgctcgaccagctcaagggc
acgggcaacacgctgttcgtcgtcgaacacgacctcgacctgatgcagcgcgccgactgg
ctggtcgatgtcggccccggcgcggggcagcatggcggcaaggtgctctacagcggtccg
ccgaaggggctcgcgaacgtcgagtcgtcgatgacgcgtcgctacctgttcgacgcgcac
gccgtgcgacgcacgccacgcacgcccacgcgctggctcgaactgcgcggcgtgcatcgc
aacaacctgcacggcgtggacgcgcgattccccatcggtgcgttcacgtccgtcacgggc
gtgtcgggctcgggcaagtcgagcctggtcagccaggcgctggtcgaactggtcggcgac
cacctcggccacgaaccggcggtggaagaaggcgagggcgatgcgccgtcgatggggccg
atcgtccgtacggtcgggcggctaggcgccggcagcgatgcgatccgccggctggtcaac
gtcgaccagaaacccatcggccgcacgccgcgctcgaacctggcgacctacaccggcctg
ttcgatcacgtgcgcaagctgttcgcggcgacgaagaccgcgaagtcccggcgctacagc
gccgggcggttctccttcaacgtcgcgcaggggcgttgcgagacctgcgagggcgaaggt
ttcgtcagcgtcgaactgctgttcatgccgagcgtctacgcgccgtgcccgacctgtcac
ggcagccgctacaacgcgaagacgctcgaagtcgaatggaacggacgcaacatcgcgcag
gtgctggcgatgacggtcgacgaggcgcggacgttcttcaaggccgagagcgtcgtcgag
cggccgctgaccttgttgcacgaaatcggcttgggctacctgcggctgggccagccggcc
acggagctgtcgggcggcgaggcgcagcgcatcaagctcgcctccgaactccagcgcagc
cagcgcggcgacacgctgtacgtgctcgacgagccgacgacgggcctgcacgcggcggac
gtcgacaagttgatggcgcagctgcacgggctggtcgatgcgggcaacacggtcgtcgtc
atcgagcacgaaatgcgggtcgtcgccgacagcgactgggtgatcgacatgggcccgggc
gcgggcgaggagggcggacgcatcgtcgccgccggcacgcccgacgaggtgagccgcgcg
aaggacagccgcacggcgccgtacctgcggaagtcgctggggtag
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