Lysobacter soli: GOY17_10655
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Entry
GOY17_10655 CDS
T06337
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lsol
Lysobacter soli
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsol03032
]
GOY17_10655
03400 DNA repair and recombination proteins [BR:
lsol03400
]
GOY17_10655
Enzymes [BR:
lsol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GOY17_10655
DNA replication proteins [BR:
lsol03032
]
Prokaryotic type
DNA Topoisomerases
GOY17_10655
DNA repair and recombination proteins [BR:
lsol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GOY17_10655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
QGW65334
LinkDB
All DBs
Position
complement(2367101..2368240)
Genome browser
AA seq
379 aa
AA seq
DB search
MAKSRKVPRRPKASGEGVLKSGVLKNGVPKNDAYVAAASDGGLVYVSDGEPGLRRMRSGK
GFRYIDAEGRTVRDADTLARIRSLAIPPAYRDVWICRRANGHLQACGRDARGRKQYRYHP
RWQEVRDSRKFDRIVAFAAALPNLRRTLRRDLAREGLGREKVLAIVVSVLADTLVRIGNT
EYARGNRSYGLTTLRNRHVEFLRGGRAHLRFRGKSGLEHDIVLDDARLTKLMRRCQQLPG
QALFQYLDDDGQQQPVDSGMVNDYLREAMGADFTAKDFRTWGGTLVAIRLLAEREVPRRE
DGEIKVTAVPAVRNEVIKEVAQLLGNTPAVCRKSYIDPTVFECWEDGRLQRAVAGARGER
QWEQAALRLLRRSRRESRT
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcccgcaaggtgccgcgacgaccgaaggcgagcggcgagggcgtgctgaag
agcggcgtcttgaagaatggcgtgccgaagaacgacgcgtacgtggccgcggccagcgac
ggcgggctggtctatgtgagcgatggcgagcccgggctgcggcggatgcgctcaggcaag
ggcttccggtacatcgacgcggaggggcgcactgtgcgcgacgccgacacgctggcgcgc
atccgctcgctggcgatcccgccggcgtatcgcgacgtgtggatctgccgtcgcgcgaac
gggcatctgcaggcctgcgggcgggatgcgcgcggacgcaagcagtaccgttaccacccg
cgctggcaggaagtccgcgactcgcgcaagtttgatcgcatcgtcgcgttcgctgccgcg
ctgccgaacctgcggcgcacgttgcgtcgcgatctggcgcgcgaagggctcggccgcgag
aaggtgctggcgatcgtcgtgtcggtgctggccgacacgctggtgcgcatcggcaacacc
gaatacgcgcgcggcaaccgttcgtacggcctcacgaccctgcgcaaccgccacgtcgag
ttcctgcgcggtggccgcgcgcacctgcgcttccgcggcaagagcgggctggagcacgac
atcgtgctcgacgatgcgcgcctcacgaaactcatgcggcgctgccagcagctgccgggg
caggcgctgttccagtacctcgacgacgacgggcagcagcagccggtcgattcgggcatg
gtcaacgactacctgcgcgaggccatgggggcggacttcaccgcgaaggatttccgcacc
tggggcggcacgctggtggcgatccggctactggccgaacgcgaggtgccgcggcgcgag
gacggcgagatcaaggtcaccgcggtaccggcggtacgaaacgaggtcatcaaggaagtc
gcgcaactgctcggcaacacgccggcggtatgccgcaagtcgtacatcgacccgacggtg
ttcgagtgctgggaagacggccgcctgcagcgcgccgtggccggcgcccgcggcgagcgc
caatgggaacaggccgcgctgcgcctgttgcggcgcagccggcgggaaagcaggacgtag
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