Lysobacter soli: GOY17_13035
Help
Entry
GOY17_13035 CDS
T06337
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
lsol
Lysobacter soli
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsol02000
]
GOY17_13035
Transporters [BR:
lsol02000
]
Other transporters
Pores ion channels [TC:
1
]
GOY17_13035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_anchor
ESPR
YadA_head
Motif
Other DBs
NCBI-ProteinID:
QGW65745
LinkDB
All DBs
Position
complement(2856434..2864497)
Genome browser
AA seq
2687 aa
AA seq
DB search
MSFFLSRQTGVFQMNKIYRVVWNAETGQWVVASEMAKGRKKKASGAVAVAAATVVLASAG
SANASLIIQGNPQETGSARACYRILDGSGGQISAGDTNVTKCIVPQTTGTASTQGDPGSQ
VVIYSSAGIAKQSGSVTGNGLEDSVNIGGWLDVWDVATFHNGADMQGTQINKLAAGTADT
DAVNVSQLKGVTTALGGGAAVNADGTIKAPTYTVNGNAYNTVGDAINNISNGGGIKYFHS
NSTLSDSTAGGTDSTAIGPEASVNAAAGGGIAIGRAASVTANATSAGVAVGTGAKADADG
AMAFGRDAKASVSSSVAIGHAAVADRASGAGGSTKGAVSVGSGGDGVATDTRQIISVARG
TQDTDAVNLSQLKGVTTALGGDAAVNADGTVKAPSYTVNGSTYNNVGDAITAAAASGTAK
YFHANSTAADSKATGVNSVAVGPNAVAGVDNSIAIGNGAKVDSTNTDNAGVAVGSGAHAN
GVSNAFGYNANASGTWSTATGVYSAASGANSTALGDQANASAATGVALGSKSVADRASGT
GGSTKGAVSVGSGGTGVATDTRQIISVARGKQDTDAVNLSQLKSVVTDLGGGAAVNADGT
VKAPTYTIQGTTANDVGTALTKLDTATTKNSGDITTLNTTVNNITNGGGIKYFHTNSTLA
DSTAGGTDSTAIGPAASVNAAAGGGIAIGHSAAITSSATTGGVAIGSGSKSDANDALAFG
RDSSASAADGVALGHAAKADRASGTGGSTKGAVSVGSGGAGVATDTRQIISVARGTQDTD
AVNLSQLKSVVTDLGGGAAVNADGTIKAPTYDVNGTNYTNAGSAIDALDTRIDGVTANPL
KFSGNSGTDVSRKLGDTLAIKGLATTAGTFSGNNIKTVTDPTNGGISIQMADAPKFGNIT
VNDSGKISGLSDGTAATDAVTKGQLDAAVIQAGAGWKIKANAGTAGTIKGGDTLAVVDGT
NTKVAFDSTKNELKVSVADAPTFSGTVTANGGLTVGASQTVDMGGNKITKVAAGTGDTDA
VNISQLKGITTAMGGGAAVNTDGTIKAPTYDVNGTNYSNVGGAVDALDTRIDGVNSTVTN
ITNGAGIKYFHTNSTLADSTAGGADSTAIGPAASVNAAAGSGIAIGHNAAVTSSATTGGI
AVGSGSKADANDALAFGRDSSASAADGVALGHAAKADRASGTGGSTKGAVSVGSGGAGVA
TDTRQIISVARGTQDTDAVNLSQLKSVVTDLGGGAAVNADGTIKAPSYDVNGTNYTNAGS
AIDALDTRIDGVTANPLKFSDTAGTTVSRKLGETLKITGVGTTAGTFSGNNIKTVADATT
GEIKIQVADAPKFGNIAVNDSGKISGVAAGTAATDVVNKGQLDAAVIQAGAGWKIKANAG
TEGTIKGGDTLAVVDGTNTKVAFDSTKNELKVSVADAPTFSGMVTANGGLTVGAGKTIDM
GGNKITKVAAGTADTDAVNVSQLKGITTAMGGGAAVASDGTITQPTYTVDGKDAKGVDGA
ITALDDSIKSAKDGIDGLNADMADVVKYDSADHKKVTFGEAGTPVVLDNVANGTVAKDSK
QAINGGQLFDVQTALTDKGLVFSANSGTNVTRKLGETLGIKGGATPVAGTFSDKNVQTAT
DTTNGGIVIKMADSPQFGNIVINKGGNGSIDMGGGKITNLTDGTAATDAVTKKQLDDAVI
SAGAGWKIKANTGTAGTIKGGDTLAVVDGTNTKVAFDSTKNELKVSVVDSPKFGDITIND
AGKITGLENGTAAGDAATAGQLQELADVIGGGTKVDPTTGEIVKPSFDMADGTKADTVAD
AIDNLDTRAKEAKDGIDGINGKIETITGDMADVVKYDSAAHDKVTLGADGTPVVLTNVAD
GKVEAGSKDAVNGGQLHDVSQSVADAIGGGASVDPTTGELTKPEFKLEDGETTVDNVGDA
ITNIDSRTTANTDIINNIINNGAGIKYFHTNSTLADSQAKGVDSVAIGGNAIANAKNSVA
LGSNSTSDRENTVSVGKAGAERQVVNVKAGVEQTDAVNVSQLKGIADAIGGGTAIDPTTG
AITPPKFDVTDKDGNTVEAGTVADAISTVDEHVTNVDNRVTNIEGDVTNIIDGKAGLVQQ
DETSREITVGKDTDGTVVNFTNKDGEARVLDGVANGEIKEGGTQAINGGQAYDIANSVTE
ALGGGSVVNPDGTISKPQYDVTNADGTTEKVDGVEGAITNLDQRTYDNTTNITNLTQQIT
NGEVGLVQYDDATGTVTVAAGKGGTTVDFANADGAARQLKNVAAGAEDTDAVNVKQLKDI
LGGTDTQDENGNYVGPTYNVTNVDGTTTEVHTVGDAITNLDGRVYNLYQNIEQGTVGLVQ
QAAAGEKLTVGKDTDGAEVNFAGTAGDRKLTGVDNGTVSDKSHDAVNGSQLYTVAQSVAD
AMGGGSTVNEDGSVTTPVYNVTNVDGTTTTVNGVEGAVTNLDQRTYSNTTQIQNITNQIN
GSGIGMVQQAAPGADLTVGKGTDGKAVNFTGTDGDRVLTGVAAGSADNDAVNIKQLKDAG
VINKDGSANAVVTYDNAEKTSITMGGEGASTPVAIHNVADGVADHDAVNISQLNQRLQSN
NTEVLNQANSYTDQRINDVWQDLGDEINQVNRQANRGIAAASALVNVTPYLPGKTAVNAG
VASYRGEAALGVGVSRWSDNGRVNFNAGVSAAKGDEPVFRVGVGYVF
NT seq
8064 nt
NT seq
+upstream
nt +downstream
nt
ttgtctttcttcctttctcgtcaaacaggtgtgtttcaaatgaacaagatttaccgggtg
gtatggaatgcggagaccggccagtgggtcgttgcttcggaaatggccaagggccgcaag
aagaaggcgtccggtgcagtggccgtcgctgccgccactgtcgtacttgcctctgcgggg
agcgcaaatgcgtcactgatcattcaaggaaatccgcaggaaacgggttccgctcgtgcc
tgctatcggattctggacggttccggcggccagatcagcgccggcgataccaacgttaca
aagtgcatcgttcctcaaaccacgggcacggcaagcacgcagggtgacccgggaagccag
gtggtcatctactcctccgcaggtattgccaagcagagcggcagtgtcaccggaaacgga
cttgaagactccgtcaacatcggtggctggctcgacgtgtgggacgtcgcgacgttccac
aatggtgccgacatgcagggcacccagatcaacaagctcgccgcgggtacagccgatact
gacgccgtcaacgtgagccagctcaagggcgtgacgaccgcgctcggcggtggcgcggcc
gtgaacgccgacggcacgatcaaggcgccgacgtacaccgtgaacggcaatgcctacaac
accgtgggcgacgcaatcaacaacatcagcaacggcggcggcatcaagtacttccattcg
aactcgaccctgtcggactcgaccgccggcggcaccgattccaccgccatcggtccggag
gcttcagtcaacgccgcggcaggtggcggcatcgcgatcggtagagctgcctcggtaacg
gcgaacgcgacgtcggcaggtgtggccgttggcacgggcgcgaaggcggatgccgacggc
gcgatggcattcggtcgtgatgccaaagcgagcgtcagctcgagcgtcgccatcggtcac
gccgcggtcgccgatcgcgcttccggcgccggcggcagcaccaagggtgcagtttcggtg
ggcagcggcggcgacggcgtggcgaccgacacgcgccagatcatcagcgtggcgcgcggt
acgcaggacaccgacgcggtgaacctcagccagctcaagggcgtcaccacggccctgggc
ggcgacgcggccgtcaacgcagacggcaccgtcaaggcgccgagctacaccgtcaacggc
agcacctacaacaacgtcggtgatgcgatcacggcagcggcagcgtccggtaccgcgaag
tacttccacgccaactcgacggcggccgattccaaggcgacgggcgtcaacagcgtcgcg
gttggcccgaatgccgtggcgggagtagataactccatcgcgatcggcaacggcgcgaag
gtcgattccaccaacaccgacaacgccggcgtcgcagtcggtagcggtgcccatgccaat
ggcgtgtcgaatgcttttggttacaacgccaatgcatcgggcacctggtccaccgcgacc
ggcgtgtactcggcggcgtccggcgccaattcgacggcgctgggcgatcaggccaacgcg
tccgctgcgacgggtgttgcgctcggttcgaagtcggtggccgaccgtgcttccggcacg
ggcggcagcaccaagggtgcggtctcggtgggcagcggcggcacgggcgttgcgaccgac
acgcgtcagatcatcagcgtggcgcgcggtaagcaggacaccgacgcggtcaacttgagc
cagctcaagagcgtggtaacggacctcggcggcggcgcggccgtgaacgccgacggcacc
gtcaaggcgccgacgtacacgatccagggcacgacggccaacgacgttggcactgcgctc
acgaagctggacaccgcgaccaccaagaactccggtgatatcaccacgctcaacaccacc
gtaaacaacatcaccaacggcggtggcatcaagtacttccacaccaattcaacgctggct
gactccacggccggcggtaccgattcgacggcaattggccctgcggcttcggtcaatgca
gcggctggcggtggcatcgccattggtcacagcgcggccatcacctccagtgcgacgacg
ggcggcgtggcaattggctcgggttcgaagtccgacgcgaacgacgccctcgctttcggg
cgtgacagctcggccagcgccgccgatggtgtcgcacttggccatgccgccaaggccgac
cgcgcgtctgggaccggcggcagcaccaagggcgctgtttctgtgggtagcggcggcgcg
ggagtcgcgaccgacacgcgccagatcatcagcgtcgcgcgcggtacgcaggacaccgat
gcggtgaacctgagccagctcaagagcgtggtgacggacctgggtggcggcgcagcggtc
aacgccgacggcacgatcaaggcgccgacgtacgacgtcaacggtaccaactacaccaac
gcgggcagcgccatcgacgcgttggacacgcgcatcgacggcgtcaccgccaatccgctg
aagttctcgggcaacagcggcacggatgtgtcgcgcaagctcggcgacacgctggcgatc
aagggcctggccaccacggccggcaccttctcgggcaacaacatcaagacggtgaccgac
ccgaccaacggcggcatctcgatccagatggcagatgcaccgaagttcggcaacatcacc
gtcaacgacagcggcaagatcagcggcctctccgatggcactgccgcgaccgacgcagtc
accaaggggcagctggacgcggctgtcatccaggccggtgcgggctggaagatcaaggcc
aacgcaggcacggccggcacgatcaagggcggcgacacgctggccgttgtcgatggcacc
aacacgaaggtggcgttcgattcgaccaagaacgagctgaaggtatcggtggccgatgcg
ccgacgttctcgggcacggtcaccgctaacggcggcctgacggtgggcgcgagccagacg
gtcgacatgggcggcaacaagatcaccaaggtcgcggccggcacgggcgacaccgacgca
gtcaacatcagccagctcaagggcatcactaccgccatgggcggcggtgcggcggtcaac
accgacggcacgatcaaggcgccgacgtatgacgtgaacggaaccaactacagcaacgtg
ggtggtgcggtcgacgcgctggatacgcgcatcgacggcgtgaacagcacggtgaccaac
atcaccaacggcgctggcatcaagtacttccacaccaattcaacgctggcggactccacg
gctggcggtgccgattcgacggccattggccctgcggcttcggtcaatgcagccgctggc
agcggcatcgccattggacataacgccgctgtcacctccagtgcgacgacgggtggcatc
gctgtcggctcgggctcgaaagccgacgcgaacgacgccctcgctttcgggcgcgacagc
tcggccagcgcggccgatggcgtcgcactcggccatgccgccaaggccgaccgcgcgtct
gggaccggcggcagcaccaagggcgctgtttctgtgggtagcggcggcgcgggcgtggcg
accgacacgcgccagatcatcagcgtcgcgcgcggtacgcaggacaccgatgcggtgaac
ctgagccagctcaagagcgtggtgacggacttgggtggcggcgcggcggtcaacgcggac
ggcacgatcaaggccccgagttacgacgtcaacggcaccaactacaccaacgcgggcagc
gctatcgacgccctggatacgcgcatcgacggcgtcaccgccaacccgctgaagttctcc
gacacggctggtacgaccgtgtcgcgcaagctcggcgaaaccctgaagatcacgggcgtg
ggcaccacggccggtaccttctcgggcaacaacatcaagaccgttgccgacgcgaccacc
ggtgaaatcaagatccaggtggccgatgcgccgaagttcggcaacatcgccgtgaacgac
agcggcaagatcagtggcgttgccgctggtacggccgcgacggacgtggtcaacaagggc
cagctggacgcggccgtcatccaggccggtgcaggctggaagatcaaggctaacgctggt
accgaaggcaccatcaagggcggcgacacgctggccgtggtcgatggcaccaacaccaag
gtggcgttcgattcgaccaagaacgagctgaaggtttcggtggccgacgccccgacgttc
tccggcatggtcactgccaacggcggcctgacggtcggcgcgggcaagacgatcgacatg
ggcggcaacaagatcaccaaggtcgcggccggcacggccgacaccgacgcggtgaacgtc
agccagctcaagggcatcaccacggccatgggcggcggcgccgcggtcgccagcgacggc
acgatcacgcagccgacctacacggtcgacggcaaggacgcgaagggcgtggacggtgcg
atcaccgcgctggacgacagcatcaagtccgcgaaggacggcatcgatggcttgaacgcc
gacatggccgacgtcgtgaagtacgactccgccgaccacaagaaggtcaccttcggcgag
gccggcacgccggtcgtgctcgacaacgtggccaacggcacggttgcgaaggactccaag
caggcgatcaacggcggccagctgttcgatgtgcagaccgcgctgaccgacaagggcttg
gtgttctccgccaacagcggcaccaacgtcacgcgcaagctgggcgagacgctgggcatc
aagggcggcgccacgccggtggccggcacgttctcggacaagaacgtccagaccgcgacc
gacaccaccaacggcggcatcgtcatcaagatggccgattccccgcagttcgggaacatc
gtcatcaacaagggcggcaacggttccatcgacatgggcggtggcaagatcaccaacctg
acggacggcaccgctgccaccgacgcagtgacgaagaagcagctggacgacgctgtgatc
agcgccggcgcaggttggaagatcaaggccaataccggcacggcgggcacgatcaagggc
ggcgacacgctggccgtggtcgatggcaccaacaccaaggtggcgttcgattcgaccaag
aacgagctgaaggtctcggtggtggattcgccgaagttcggcgacatcaccatcaacgac
gccggcaagatcaccggcctggaaaacggcacggccgccggcgacgccgccacggctggc
cagctgcaggaactcgccgacgtcatcggtggtggcacgaaggtcgatccgaccacgggc
gagatcgtcaagccgtcgttcgacatggccgatggcacgaaggccgacacggtcgcagac
gccatcgacaacctcgacacgcgcgccaaggaagcgaaggacgggatcgacggcatcaac
ggcaagatcgaaacgatcaccggcgacatggccgacgtggtcaagtacgactcggccgcg
cacgacaaggtgaccctgggcgccgacggcacgccggtggtgctgaccaacgtggccgac
ggcaaggtggaagcgggctcgaaggacgcggtcaacggcggccagctgcatgacgtcagc
cagtccgtggccgacgccatcggcggcggcgcgtcggtcgatccgacgacgggcgaattg
accaagccggagttcaagctggaagacggcgaaaccaccgtcgacaacgtgggcgatgcg
atcaccaacatcgacagccgcaccacggccaacacggacatcatcaacaacatcatcaac
aacggcgcgggcatcaagtacttccacaccaactcgacgctggcggactcgcaggcgaag
ggcgtggactcggtggccatcggcggcaacgccatcgccaacgcgaagaactcggtggcc
ctgggttccaactcgacgagcgatcgcgagaacacggtgtcggtgggcaaggcgggtgcc
gagcgccaggtcgtcaacgtgaaggccggcgtcgagcagaccgacgcggtcaacgtctcg
cagctgaagggcatcgccgacgccatcggcggcggcacggcgatcgacccgacgacgggc
gcgatcaccccgccgaagttcgacgtcaccgacaaggatggcaacaccgtcgaggcgggc
accgtggccgatgcgatcagcacggtcgacgagcatgtcaccaacgtcgacaaccgcgtc
accaacatcgaaggcgacgtcaccaacatcatcgacggcaaggccggcctggttcagcag
gacgagacgagccgcgagatcacggtgggcaaggacaccgacggcaccgtcgtgaacttc
accaacaaggacggcgaagcgcgcgtcttggacggtgtggcgaatggcgagatcaaggaa
ggcggcacgcaggccatcaacggtggccaggcgtacgacatcgccaattcggtgaccgaa
gcgctgggcggtggttccgtggtgaatccggacggcaccatctcgaagccgcagtacgac
gtcaccaacgccgacggcacgacggagaaggtcgacggcgtcgaaggcgccatcaccaac
ctcgaccagcgcacatacgacaacaccaccaacatcaccaacctgacccagcagattacc
aacggtgaagtcggcctggtgcagtacgacgatgcgaccggcacggtcaccgtggcggcg
ggcaagggcggcacgacggtcgacttcgccaatgccgacggcgcagcccgtcagctgaag
aacgtcgccgccggtgccgaagacaccgacgcggtcaatgtcaagcagctgaaggacatc
ctgggcggcacggacacgcaggacgagaacggcaactacgtcggcccgacctacaacgtg
accaacgttgatggcaccaccaccgaagtgcacaccgtgggcgatgcgatcaccaacctc
gacggccgcgtctacaacctgtaccagaacatcgagcagggcaccgtgggcctggtccag
caggcggcagcgggcgagaagctcaccgtcggcaaggacaccgatggcgccgaggtgaac
ttcgccggcacggcgggcgaccgcaagctgacgggcgtggacaacggtacggtctccgac
aagagccacgacgcggtgaacggcagccagctgtacacggtggcgcaatccgtggccgat
gccatgggcggcggttcgacggtcaacgaagacggctcggtcaccacgccggtctacaac
gtgaccaacgtcgacggcacgaccacgacggtcaacggcgtggaaggcgccgtcaccaac
ctcgaccagcgcacctacagcaacaccacgcagatccagaacatcacgaaccagatcaac
ggttcgggtatcggcatggtgcagcaggcggccccgggcgcggacctgacggtcggcaag
ggcaccgacggcaaggcggtgaacttcaccggcaccgacggcgaccgcgtgctgacgggt
gttgcggccggttcggccgacaacgacgccgtcaacatcaagcagctgaaggacgcgggc
gtcatcaacaaggacggcagcgccaatgccgtggtgacctacgacaacgcggagaagacc
agcatcacgatgggtggtgagggtgcttcgacgccggtcgcgatccacaacgtcgccgac
ggcgtggccgatcacgacgcggtcaacatcagccagctgaaccagcgcctgcagagcaac
aacacggaagtgctcaaccaggccaacagctacaccgaccagcgcatcaacgacgtgtgg
caggacctcggcgacgagatcaaccaggtcaaccgccaggccaaccgcggcatcgcggcg
gcatcggccctggtcaacgtgacgccgtacctgccgggcaagaccgcggtcaacgccggc
gtcgcgtcctaccgtggcgaagccgcgctgggcgtgggtgtgtcgcgctggagcgacaac
ggccgcgtgaacttcaacgcgggcgtgtccgcggcgaagggcgacgagccggtgttccgc
gtcggcgtcggctacgtcttctga
DBGET
integrated database retrieval system