Lysobacter soli: GOY17_14300
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Entry
GOY17_14300 CDS
T06337
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lsol
Lysobacter soli
Pathway
lsol00521
Streptomycin biosynthesis
lsol00523
Polyketide sugar unit biosynthesis
lsol00541
Biosynthesis of various nucleotide sugars
lsol01100
Metabolic pathways
lsol01110
Biosynthesis of secondary metabolites
lsol01250
Biosynthesis of nucleotide sugars
Module
lsol_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GOY17_14300 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GOY17_14300 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GOY17_14300 (rfbC)
Enzymes [BR:
lsol01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GOY17_14300 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
QGW65972
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Position
complement(3133886..3134443)
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AA seq
185 aa
AA seq
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MKIIETDLPGCVVIEPRVFGDDRGFFFESFNLDKLGDAGIKPTFVQGNVSSSRRGVLRGL
HYQWPKPQGKYVSVVEGEVWDVAVDIRRGSPTFGRWTAVLLNAENKRHFWIPEGFAHGFV
TLSERAVFTYLCTETYDASADAAVRWNDATLGIDWPMSDVTLSDKDARAPFLDEIPEDRM
PVYVP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcatcgagaccgatctgccgggttgcgtcgtgatcgagccgcgcgtattcggt
gacgaccgcggcttcttcttcgagtcgttcaacctcgacaagctcggcgatgccgggatc
aagccgacgttcgtgcagggcaacgtgtcctcgtcgcgtcgcggcgtgctgcgtggcctg
cattaccagtggcccaagccgcagggcaaatacgtgtcggtggtcgagggcgaggtgtgg
gacgtggcggtggacatccgacgcggatcgccgacgttcggccgctggaccgcggtgctg
ctcaatgccgaaaacaagcgccacttctggattcccgaaggcttcgcgcacggcttcgtg
acgcttagcgagcgcgccgtgttcacgtacctgtgtaccgaaacctacgacgcgtcggct
gatgccgccgttcgctggaacgacgcgacgctgggcatcgactggcccatgtccgatgtg
accctgtccgacaaggacgcgcgcgcgccgttcctggacgagatcccggaagaccgcatg
cctgtgtacgtcccatga
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