Lysobacter soli: GOY17_14310
Help
Entry
GOY17_14310 CDS
T06337
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lsol
Lysobacter soli
Pathway
lsol00521
Streptomycin biosynthesis
lsol00523
Polyketide sugar unit biosynthesis
lsol00525
Acarbose and validamycin biosynthesis
lsol00541
Biosynthesis of various nucleotide sugars
lsol01100
Metabolic pathways
lsol01110
Biosynthesis of secondary metabolites
lsol01250
Biosynthesis of nucleotide sugars
Module
lsol_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GOY17_14310 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GOY17_14310 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GOY17_14310 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GOY17_14310 (rfbB)
00525 Acarbose and validamycin biosynthesis
GOY17_14310 (rfbB)
Enzymes [BR:
lsol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GOY17_14310 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QGW65974
LinkDB
All DBs
Position
complement(3135334..3136386)
Genome browser
AA seq
350 aa
AA seq
DB search
MATWIVTGGAGFIGGNFVLDAVQRNIKVVNLDALTYAGNVDTLASLENDPRHVFVHGDIG
DAALVERLLKEHRPDAVINFAAESHVDRSIDGPAAFVQTNVVGTLSLLEKTRDYWKSLDA
AGRDAFRFLHVSTDEVYGTLGETGKFTEETPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGQYQFPEKLIPLIIARALAGEPLPVYGDGRNVRDWLYVGDHCAAIRRVLEA
GRIGETYNVGGDAERQNLEVVQTICRLLDERQPLADGRARESLITFVADRPGHDRRYAID
ASKLKGELGWAPTVTFEQGIALTVDWYLQNQPWVKRVLDGSYRLERIGQG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtggctacgtggatagtgacaggcggcgccggcttcatcggcggcaacttcgtgctggat
gcggtccagcgcaacatcaaggtcgtgaacctcgacgcgctcacgtacgcgggcaacgtc
gatacgcttgcgtcgctggagaacgatccgcggcatgtgttcgtccacggcgatatcggt
gatgccgcgctcgtcgagcgactgctgaaggagcatcgccccgacgccgtgatcaatttc
gcggcggagagccacgtcgaccggtcgatcgacggtccggcggcgttcgtccagacgaac
gtcgtgggaacgctcagcctgctggagaagacgcgcgactactggaagtcgctcgatgcc
gccggccgcgatgccttccgcttcctgcacgtatcgacggatgaggtttacggcacgctc
ggcgagaccggcaagttcaccgaggaaacaccgtacgcaccgaattcgccgtactcggcg
tccaaggcggcgtcggatcatctggtgcgcgcgttccaccacacctatggcttgccggtg
ctgacgacgaactgctcgaacaattacgggcagtaccagttccccgaaaagctcattccg
ctgatcatcgcccgcgcgttggccggcgagccgctgccggtgtacggcgatggccgtaac
gtgcgtgactggctctacgtcggcgatcactgcgcggcgatccgccgcgtcctggaagcc
ggtcgcatcggcgagacctacaacgtcggtggtgatgccgagcgccagaacctcgaggtc
gtgcagacgatctgccgcctgctggacgagcggcagccgcttgccgacggccgcgcgcgc
gagtccctgatcaccttcgtcgccgatcgccccggacacgatcgccgttacgccatcgac
gcctccaagctcaagggcgaactgggatgggcaccgacggtgaccttcgaacagggaatc
gccctcaccgtggactggtacctccagaaccagccgtgggtgaagcgcgtgttggacggc
agctatcgactcgagcgcatcggacaaggctaa
DBGET
integrated database retrieval system