Lysobacter soli: GOY17_15570
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Entry
GOY17_15570 CDS
T06337
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
lsol
Lysobacter soli
Pathway
lsol02020
Two-component system
lsol02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GOY17_15570
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GOY17_15570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsol03021
]
GOY17_15570
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lsol02035
]
GOY17_15570
Transcription machinery [BR:
lsol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GOY17_15570
Bacterial motility proteins [BR:
lsol02035
]
Flagellar system
Flagellar assembly proteins
Stator
GOY17_15570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QGW66206
LinkDB
All DBs
Position
3411940..3412707
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AA seq
255 aa
AA seq
DB search
MNAAAQHYKATQRAADTVNATEVVEKHGELVRRIAHHLAARLPASVEIDDLIQAGMLGLI
DAARNFQADQGAAFETYASIRIRGAMIDEIRRGDWVPRSVHRRYRDVVAATREVEQSTGR
AATAQEVATRLAVPLDEYHRMLEDAARGQLISLEAHVDEHDGEPHLGGHAGATPAREFEQ
VAFKQALGAAIGNLPEREQLVLSLYYEQELNLREIGAVLNVSESRVCQIHGQAMLRLRSR
LGEWRGSHNDDDDEF
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccgcccagcactacaaggcgacccagcgcgcggccgacacggtcaacgcg
acggaagtcgtcgagaagcatggcgaactggtgcgccgcatcgcgcaccacctcgccgcg
cgactgcccgccagcgtcgagatcgacgacctgatccaggccggcatgctcggcctgatc
gacgccgcccggaatttccaggccgaccagggcgccgcgttcgagacgtacgcgtcgatc
cgcatccgcggcgcgatgatcgacgagatccgccgcggcgactgggtgccgcgctcggtg
catcgccgttatcgcgacgtcgtcgccgccacgcgcgaggtcgagcagagcaccggccgt
gccgcgaccgcgcaggaagtggccacccggctcgccgttccgctcgacgaataccaccgc
atgctcgaggacgccgcgcgcggccagctcatcagcctggaagcgcacgtcgacgaacac
gatggcgaaccgcacctgggcggccacgccggtgcgacgcccgcgcgcgagttcgaacag
gtcgccttcaagcaggcgctcggcgccgcgatcggcaacctgcccgaacgcgagcagctg
gtgctgtcgctgtactacgagcaggaactgaacctgcgcgagatcggcgcggtgctcaac
gtttccgaatcgcgcgtctgccagatccacggccaggcgatgttgcgcctgcgttcgcga
ctgggcgaatggcgcggctcgcacaacgacgacgacgacgagttctga
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