Lysobacter soli: GOY17_18135
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Entry
GOY17_18135 CDS
T06337
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lsol
Lysobacter soli
Pathway
lsol03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lsol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GOY17_18135 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsol03400
]
GOY17_18135 (mutM)
Enzymes [BR:
lsol01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GOY17_18135 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GOY17_18135 (mutM)
DNA repair and recombination proteins [BR:
lsol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GOY17_18135 (mutM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF6011
T2SSF
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
QGW66638
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Position
3991793..3992620
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AA seq
275 aa
AA seq
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MPELPEVETTRRGLAPHVEGRRVSNVVLRRPDLRWPIPYEVVSLLPGQRVTAVRRRAKYL
LLDTAAGSALLHLGMSGSLRVLPADTPVRAHDHVDIALEPSGRQGARVLRFNDPRRFGCL
LWQPPGETHELLADLGPEPLSDQFDGDYLFALSRGRSAPVKTFLMDQRVVVGVGNIYVAE
ALFAAGISPLRAAGKVSRERYQRLAEEIRRILGHAIERGGTTLRDFLAPDGAPGYFEQEL
SAYGRGGEPCPRCGRPLKQASIGQRTTVWCGHCQK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaagtcgaaaccacccgtcgcggacttgcgccgcatgtcgaaggc
cgccgcgtctccaacgtcgtcctgcgccggccggacctgcgctggccgatcccgtacgag
gtggtgagcctgcttcccggccagcgcgtgacggcggtgcgccgccgcgccaagtacctg
ctgctggacaccgccgccggcagcgcgctgctgcacctggggatgtccggcagcctgcgc
gtgctgcccgccgacacgccggtgcgcgcgcacgaccacgtggacatcgcgctggaaccc
agcgggcggcagggcgcgcgcgtgctgcgcttcaacgacccgcgccggttcggctgcctg
ctgtggcagccgccgggcgagacgcacgaactgctcgccgacctgggtccggaacccctg
tcggaccagttcgacggcgactacctgttcgccctgagccgcggccgcagcgcgccggtg
aagactttcctgatggaccagcgggtcgtggtcggcgtcggcaacatctacgtggccgag
gcgctgttcgccgccggcatctcgccgctgcgcgccgccggcaaggtctcgcgtgagcgc
taccagcggctggcggaggaaatccgccgcatcctcggccacgcgatcgaacgcggcggg
acgacgctgcgggacttcctggcgccggatggcgcgcccgggtacttcgagcaggaactg
tccgcctacggccgcgggggcgaaccctgcccgcgttgcgggcggccgctgaagcaggcg
tcgatcggccagcgcaccaccgtctggtgcgggcactgtcagaaataa
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