Lysinibacillus sphaericus: Bsph_0115
Help
Entry
Bsph_0115 CDS
T00656
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
lsp
Lysinibacillus sphaericus
Pathway
lsp02020
Two-component system
lsp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bsph_0115
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bsph_0115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsp03021
]
Bsph_0115
Transcription machinery [BR:
lsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bsph_0115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_23
Sigma70_r4
HTH_IclR
HTH_38
TetR_C_8
HTH_20
MarR
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ACA37751
UniProt:
B1HSZ7
LinkDB
All DBs
Position
complement(125643..126929)
Genome browser
AA seq
428 aa
AA seq
DB search
MQLSIKQTQELQIVMSAQLRQAIELLQYSTQELEQYIREQELVNPLIELSEPTFKEHLQI
SKTCGRHYNNWHLSTKCEKNIRDELFQQVRLTFDNEKDIQLLKHIIYHLDDNGYYEQSIQ
SSYNDLEIEKGIHLLQTIGPLGIGARNLKECLLLQTIYGPNSPAHADTIISNYLEELAHN
NWKKISKELDISLNDLQIIYLFIQSLQPKLSSLFYQELVHTTIPDIIVDIVDGGITFSLN
DYYLPKVSIHADYFPYIKAHSSEKSYFKKHLADYHWLVNSIEQRRNTMINIMKALIEKQR
KFFLDGLDAIQPLTLREIADQIDVHESTVSRITTNKYVQTAFGTFELKELFSSKLSTANG
HSVSQIKVKSLLSDYIKSENKAKPFSDQKIAEYFNSALGIEISRRTIAKYREDMSIPSSA
RRKIIPFK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcaactttctattaaacaaacacaagaattacaaatagttatgtctgcccaacttcgt
caggcaattgagctactccaatattcaactcaggagctagaacaatatatacgtgaacaa
gaactcgttaatcctttaatcgagctaagtgaaccaacatttaaagagcatctacagatt
tccaaaacgtgtggcagacactataacaattggcatctttctacaaaatgtgaaaaaaat
atccgtgatgagctgtttcagcaggtcaggctaacttttgataatgaaaaggacattcag
ctcttaaaacatattatttaccatttagatgacaatgggtattatgagcaatccatacaa
tcttcttataatgacctagaaatagaaaagggcattcatttattacaaacgattggtcct
ctaggaatcggtgcacgcaatttaaaagagtgtttactattacaaactatttatggtcct
aacagccctgctcatgccgataccattatttctaattatctagaagagctcgctcataat
aattggaaaaaaatatcaaaagagctggatatatccctaaatgacttacaaatcatctat
ctttttatacaatcactacagccaaagctaagctcattgttttatcaggaattggtacat
acaacaataccagatattattgttgatattgtggacggtgggattaccttttcgttgaac
gattattatttaccaaaggttagtattcatgctgactactttccttatataaaagctcat
tcctcagaaaagagttattttaaaaaacacttagctgactaccactggctagtgaacagc
atagaacaacgtcgaaatacaatgatcaacattatgaaggcccttattgaaaaacaaaga
aagttctttcttgatggccttgacgccatacaaccacttacgttgcgtgaaattgctgac
caaatagatgttcatgaatcgacggttagtcgcattacaactaataagtatgtacaaact
gcttttggtacatttgaattaaaagaattattcagctctaaattgtcgacagcaaatggt
catagtgtgtcacaaataaaggtaaaatctttgctatcagactatatcaaatcagaaaat
aaggcaaagcccttctctgatcaaaaaatagctgaatattttaactctgctttaggtatt
gaaatatctcgacgtaccatagctaaatatcgcgaggacatgagtatcccctcctcggca
agacgtaaaataataccttttaaataa
DBGET
integrated database retrieval system
