Lysinibacillus sphaericus: Bsph_0869
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Entry
Bsph_0869 CDS
T00656
Name
(GenBank) superfamily I DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsp
Lysinibacillus sphaericus
Pathway
lsp03420
Nucleotide excision repair
lsp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bsph_0869
03430 Mismatch repair
Bsph_0869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsp03400
]
Bsph_0869
Enzymes [BR:
lsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bsph_0869
DNA repair and recombination proteins [BR:
lsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bsph_0869
MMR (mismatch excision repair)
Other MMR factors
Bsph_0869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD_C
UvrD-helicase
Viral_helicase1
AAA_19
DEAD
AAA_30
SLFN-g3_helicase
T2SSE
NACHT
ResIII
nSTAND3
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACA38485
UniProt:
B1HZ85
LinkDB
All DBs
Position
complement(912175..914403)
Genome browser
AA seq
742 aa
AA seq
DB search
MTVKHPDFQTEVERLAYTQSYMQQILNESQRDLKSAQENIRKSMADLDYLDSSLSYLNIL
TNARFFEMARNQKEGLEAVQKKPYFARIHFQKTGDPEELLYIGKTSLFHRETHEPIIVDW
RSPVANVYYDGRLGDMEYDVRGEIHKGHLFAKRQYKIENGDLLDIRDIDLTTNDELLQEA
LAGKADVRLTEIVSTIQKEQNEIIRAHLRQPIIVQGAAGSGKTTIALHRISYFLYTMGEH
FNPEQLMILAPNKLFIDYIGDVLPELGVDKICQTTFTDYVLSATKLKLKLQNPNEQLESL
VAGGNSQPTAWIAEMKGSLYYRDVIERYIQKLEQDIAEQFEDVYIERYCIMRASHLKKLF
LYEFSYMPIEKRLAHIKKVLASHVRQKKQSVLATLHKKYDEALGKALNGIRDDEKRRRVV
TKFIDERDERIPAIEKEAKSTAAAYMRRFSKHNIKTLYRSLLTNAELLAELAPEWHYLEQ
QQFLQSHRKEQWALEDLAALYYLQARLKGIPDEWKMRVVFIDEVQDYSLFQLAALKTGLD
TDMFTMVGDLAQGIHSYRSLTAWEPVQGLFPRASFRTLQKSYRTTIEIMEVANEILAQMD
EQLPLVEPVVRHGNVPSFIQAEQFDALKIKEIFDTIRQHGHRSIALICKTTVEAIMMQND
LTAHQLPAQLLTENDSINQEMLLVVPSHLAKGLEFDAVIVAAFHTPFYDTPIDRKLLYVA
LTRAMHELYLIGPSKNTFLLEN
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaaacatccagattttcagacagaagtagagcgattagcgtatacccaaagt
tatatgcaacaaattttaaatgagtcacaaagagatttaaaatccgctcaagaaaatatt
cggaagtcgatggcagatcttgattacttagattctagtttgagttatttaaacatctta
accaatgcccgattctttgaaatggcccgtaatcaaaaggaagggctagaagccgttcaa
aagaagccttattttgccagaatccattttcaaaagacaggtgaccctgaagaacttctt
tacattggaaaaacctcgttatttcatcgtgaaacacatgagccgattattgtcgattgg
cgctcaccagtagcgaatgtctattatgatggccgccttggtgatatggagtacgatgtc
cgtggagaaattcataaagggcatctatttgctaagcgacaatataaaattgaaaatggc
gatttgctcgatatacgtgatattgatttaactacgaacgatgaactgttacaagaagca
ttggctggtaaagctgatgttcgtctaaccgaaattgtctcgacaatccaaaaagagcag
aatgaaattattcgcgcacatcttcgtcaaccaataattgtgcagggagcagcaggcagt
ggaaaaactaccattgccctacaccgaatatcctatttcctctacacaatgggtgagcat
tttaatcctgagcagctcatgattttagcaccgaataagttatttattgattatattgga
gatgtcttaccagaactaggcgtcgataaaatatgccaaactacttttaccgattacgtt
ctatccgccactaaactaaaattaaaacttcaaaatccaaatgaacaattagaatcgctt
gtggcaggaggaaattctcagccaactgcttggatagctgaaatgaaaggctctctttat
tatcgcgatgttatcgaacgctatatccaaaaactagagcaagatattgcagagcaattt
gaagatgtttacattgaaagatactgtatcatgcgggcttctcaccttaagaagctattt
ttatatgaattttcttatatgccaatcgaaaaacgactagcacatattaaaaaggtgtta
gctagccatgttcgtcagaaaaagcagtctgtcttagctacactccataaaaaatatgat
gaagcactaggcaaggccttaaatggaattcgagatgatgaaaaacggcgacgtgttgta
acaaagtttatcgatgaacgagatgagcgaattcctgccattgaaaaagaagccaaatca
acggcagctgcatatatgcgtcgcttttcgaaacacaacattaaaactctctatcgttca
ctgctcaccaacgctgaacttttagcggagttggcacctgaatggcattatctcgaacaa
cagcaatttttacaatcacatcgcaaggaacaatgggcacttgaagatttagctgcactt
tattatttacaggcacgcttaaaaggcatcccagatgaatggaagatgcgcgttgtcttt
atcgatgaagtacaagactatagtctttttcagctcgctgctttaaaaacaggtttggat
actgatatgtttacaatggttggtgatttagctcaaggaattcatagctatcgctcatta
actgcttgggagcctgtccaaggtttattcccacgagcaagctttcgaactttgcaaaaa
agctatcgtacaaccattgaaattatggaagtcgctaatgaaattttagcgcaaatggat
gaacaacttccgttggtggagccagttgttcgtcatggcaatgtgcctagttttattcaa
gcggaacagttcgacgccttaaaaattaaagaaatttttgacacgattcgtcaacatgga
catcggtccattgctttaatatgcaaaacgactgttgaagcaataatgatgcaaaacgat
ttaacagctcaccaattacctgcacagctcctaactgaaaatgattccattaatcaggaa
atgttactcgttgttccaagccatttagcgaaaggacttgaatttgatgccgttattgta
gctgcgtttcatacgcccttttacgacacgcccattgaccgaaagctactctatgtagca
ctcacacgggccatgcatgagctttacctaataggtccctccaaaaatacattcttatta
gaaaattaa
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integrated database retrieval system