Lysinibacillus sphaericus: Bsph_0986
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Entry
Bsph_0986 CDS
T00656
Name
(GenBank) Transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
lsp
Lysinibacillus sphaericus
Pathway
lsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bsph_0986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsp03021
]
Bsph_0986
03019 Messenger RNA biogenesis [BR:
lsp03019
]
Bsph_0986
Transcription machinery [BR:
lsp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Bsph_0986
Messenger RNA biogenesis [BR:
lsp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bsph_0986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
ATPase_2
AAA_22
AAA
AAA_25
DUF3418
AAA_24
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ACA38598
UniProt:
B1I060
LinkDB
All DBs
Position
1042667..1043950
Genome browser
AA seq
427 aa
AA seq
DB search
MSALTIAQLENMTLKELYALARQYKISYYSKLTKKELIFAILKTRSEQEGYFFMEGVLEI
VSQEGFGFLRPINYSPSKEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLQVDA
VNGEDPEVAKERVHFPALTPLYPNRQIKLETTQRNLSTRIMDLVAPVGFGQRGLIVAPPK
AGKTSLLKEIANAITTNHPEAELIVLLIDERPEEVTDIERSVNADVVSSTFDEVPENHVK
VAEIVLERARRLVEHKRDVIILMDSITRLARAFNLVIPPSGRTLSGGIDPAAFHRPKRFF
GSARNIEEGGSLTILATALVDTGSRMDEVIYEEFKGTGNLELHLDRQLAERRIFPALDIR
RSGTRKEELLLEPEQLEKLWAIRKTFSDAPDFAERFLKKLRTTKSNEEFFEKLNEDMKKA
TKGKGLL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcattgacaatcgctcaattagaaaacatgacgttaaaagagctttacgctctt
gcacgccaatataaaatttcatattatagcaagctaacgaaaaaagaattaatatttgct
attttgaaaacgcgttcagagcaagaaggctatttctttatggaaggcgtacttgaaatt
gtttcgcaagagggctttggcttccttcgaccaataaactactctccaagtaaagaagat
atttatatttctgcatctcaaatacgtcgctttgatcttcgtaatggggacaaggtatct
gggaaggtgcgaccacctaaagaaaatgaacgttattacggcttattacaagtagatgcc
gtcaatggcgaggatcctgaagttgcaaaggaacgtgtgcatttccctgctctaacaccg
ttatatccaaacagacaaattaaactggaaacaactcagcgtaatttatcaacacgtatt
atggatttagtggcgcctgtaggttttggtcagcgtggattaatcgtagctccgccgaaa
gcggggaaaacatctttattaaaagaaattgcaaacgctattacgacaaatcatccagaa
gcagagttaattgtcttactgatagatgaacgtcctgaagaagtaacggatattgagcga
tctgtaaatgcagatgttgttagctcaacgtttgatgaagttccagagaatcatgtcaaa
gtagcagaaatcgttttagaacgtgcacgccgtttagtggaacataaacgtgatgtcatt
attttaatggattctatcacacgtttggcacgtgcatttaacctagttattcctccaagt
ggacgcacgctttcaggggggattgaccctgctgccttccatagacctaagcgtttcttc
ggatcggctcgaaatattgaagaaggcggtagcttaacgatattagcgactgctttagta
gatactggttcacgtatggatgaggttatttacgaggaatttaaggggacaggtaattta
gagcttcatctagatcgccagttggcagagcgccgaattttccctgcgcttgatattcgc
cgttcaggtacacgtaaggaagagttattgcttgagcctgaacaacttgaaaaactatgg
gcaattcgtaaaacattttcagacgcgcctgattttgcggaacgcttcttgaaaaaactt
cgtacaacaaaatctaatgaagaattttttgaaaaactgaacgaagatatgaaaaaagca
acaaaaggtaaaggtttattatag
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