Lysinibacillus sphaericus: Bsph_1199
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Entry
Bsph_1199 CDS
T00656
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lsp
Lysinibacillus sphaericus
Brite
KEGG Orthology (KO) [BR:
lsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsp03400
]
Bsph_1199
Enzymes [BR:
lsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bsph_1199
DNA repair and recombination proteins [BR:
lsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Bsph_1199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ACA38807
UniProt:
B1HN90
LinkDB
All DBs
Position
1287289..1291005
Genome browser
AA seq
1238 aa
AA seq
DB search
MVQTIPIKPADVSWTDDQWKAIYASGQDTLVSAAAGSGKTAVLINRMIEKVIATDNPINV
DELLVVTFTNASAAEMRHRMSEALEKAIVENPTSSHLRRQLSLINKAQISTLHSFCLAIV
KQYAYLLDIDPGFRIANEAEVALLRDDIVADVLEGAYDSEEETQVQAIYRLVDSFTSDRD
DQAIETLISKLYDTSRVHAEPQRWLWSLPKAYELAEEVTIDDLELSHYVKLTVRHSLEEA
FVLISEMRAITLQPDGPAPYAETAEIDFAMIQEGIRISQEGTWQELFDYFATVKWSTLKR
VSKDALVDVELQELAKKKREAAKKIMNKMKETYFIRTPARLLEEIRLMAPIIGTLVELTT
IFSEQFRLAKLERGIIDFSDLEHYALQILTVEVDGELQPSPVALDLKKRFKEVLVDEYQD
TNMLQETILQLVKSGEEQDGNLFMVGDVKQSIYRFRLAEPKLFMRKYSEFLETPDATGMR
IDLNANFRSRKEVLNVTNYIFAQIMGERVGEILYDDNASLKPAAPYDEKEVPVELVVMHP
PQDEETVDEQEDKTDEASELEELKKSQYEARFIIDRIRQMMEDGTTVYDTKSMTERPLKY
SDIVILMRSMTWSTDLVEEFKLAGIPLYAESSKGYFDALEVMIILNVLKVVDNPYQDIPL
ASVLRAPFVGLTENELAKIRLADSKVPFYDALRQFIRSEGQGVQTTTFEKLQRFMLAFEN
WRDLARRGSLSDLIWKIYLDTHYYEMVGAMPNGKQRQANLRILHDRALMYEQTAFRGLFR
FLRFIDRMRTRGDDLGTAKSIGEKDDVVRLVTIHSSKGLEYPVVFVAGMGRPFNKMDFHH
PYLFDQDFGLAVKAIDPENRITYTSLPFLALKEKKELEMRAEEMRVLYVAMTRAKERLIL
VGSVKNWEKTRDNWQDAQNIPSDAPLQEYLRARANSYLDWIGPAVARHGDFASQATTSYK
ELDSPSHWWIQPIDTRHYSYDIQAFNDEIQQHLTTQEDEALLSEIKARFHAQYTYQKSTR
KRSKTSVSEIKRLENLQRQEEPEYYFATPAKRTSTSIAPRPTFLQDQQLTGTEIGTAVHT
VMQHIPQFGFDTIEAVKGFVANLVAKQLLTEAEGKVVPIKKVYHFFHTEIGQRFKQARQI
RREMPFTISRVDEDGDAQIVQGIIDCLFEDEYGNWVLLDYKTDRILPHFAKEPALTKEIM
GRYAVQLRVYSEAIESILQIKVSEKVLYLFDNEQTVQA
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggtccaaacaattcctataaagccggcggatgtctcatggacagacgatcagtggaaa
gccatttacgctagtggtcaggatacacttgtgtcggctgcagcggggtctgggaaaaca
gcggtactgattaatcgtatgattgaaaaagttattgctactgacaatcccatcaatgta
gatgagctactggtggtgacctttacgaatgcttcagcagctgaaatgcgccatcgaatg
tcagaagctctagaaaaggctatagtagaaaatccaacttccagtcatttaagacgacaa
ctgagtcttattaataaggcgcaaatatcaacattgcattctttttgtttagcaattgtt
aaacagtacgcttatttgctcgacatcgatcctggatttcgtattgctaatgaggcagag
gtagccttattaagagatgatatagtagcggatgttctagaaggagcctatgattctgaa
gaagagacacaggtacaagctatttatcgacttgtggatagctttacgtcagatcgagat
gatcaggctatagaaacgctgattagtaagctttatgatacttctcgggtacacgcagag
cctcaaagatggctgtggagcttaccgaaagcttatgaattagcggaggaagtgacaatt
gatgatttagagctatcccactatgttaaattgactgttcgacatagtttggaggaagcc
ttcgtactaatttcagaaatgcgagcaattaccctccaacccgatggaccagccccatat
gctgaaacggcagaaattgattttgctatgattcaggaagggattcgaataagtcaggaa
ggtacatggcaggaactctttgattattttgcgactgtcaagtggtctacattaaagcga
gtatcaaaggatgctttagtagacgtggagttacaggagcttgcaaagaaaaagcgggaa
gcagcgaaaaaaattatgaataaaatgaaagaaacctattttattcgcacccccgcacgt
ttgctagaagaaatacgcttgatggcgccaataattggcacattagtggaattgacgact
atttttagtgagcaattcagacttgccaagttagagcgaggtattattgatttttcagat
ttagagcattatgcactgcaaattttaacagttgaggtagatggagagctacagccatcc
cccgtagcgcttgatctgaaaaaacgttttaaggaagtacttgtggatgaatatcaggat
acaaatatgctacaggaaacgatcttacaacttgtcaaatcaggagaagaacaggatgga
aatctgtttatggtgggagacgtcaagcaaagtatttatcgtttccgcttagccgaacct
aagctctttatgaggaaatatagtgagtttttggaaacgcctgatgcaacgggcatgcgt
atcgatttaaatgccaactttcgtagtcgtaaagaggtattgaacgtgacaaactatatt
tttgctcaaattatgggtgagcgtgtcggcgaaattctctatgatgacaatgcgtcatta
aagccagcagcgccctatgatgaaaaagaagtacctgttgagcttgtcgtgatgcatcct
ccacaggatgaggaaacagtagacgagcaagaggataaaactgatgaagcatctgagtta
gaggaattaaaaaagtcacaatatgaagcacgctttattattgatcgtatacgacagatg
atggaagatggcaccactgtctatgatacgaaatcaatgacagaaaggccattgaagtat
agtgatattgttattttaatgcgctctatgacatggtcgacggatttagtggaggaattt
aaactagcgggtattccactttatgcagagtcgtccaagggctattttgatgcactggaa
gtcatgattatattaaatgtcctaaaggtagtggataacccttatcaggacatccccttg
gcttctgtactgcgtgcaccttttgttggcttgacggaaaatgaattagctaaaatccgc
ttagctgattcaaaggtacctttctatgatgcattacgacaatttattcgaagtgaagga
cagggagtacagacgactacatttgaaaaacttcaacgctttatgctagcttttgaaaat
tggcgagatttagcacggcgtggatcactatcagatttaatttggaagatttatttagat
acacattattatgaaatggttggtgcaatgcccaatggtaagcagcggcaggccaattta
cgtatcttacatgatcgtgcattaatgtatgagcaaacggcctttcgaggactcttccgc
tttttacgctttatagatcggatgcgtacacgcggagatgatttagggactgctaaatca
attggtgaaaaggacgacgtagtacgccttgtgaccattcactcctccaagggattagaa
taccctgtagtctttgtggcaggaatgggacgcccatttaataagatggattttcatcat
ccttatttattcgaccaagattttggcctagctgtaaaggccattgacccagaaaatcga
ataacttatacttcattaccgtttttggcgctgaaagagaaaaaagagctggaaatgcgt
gcagaggaaatgcgtgtcttatatgttgccatgacacgtgcaaaggaacgtttgatttta
gtgggctccgtgaaaaattgggagaaaacacgagacaactggcaggatgcacaaaatata
ccgagtgatgctccgcttcaagaatatttgcgggctagagctaatagttatctagactgg
attggaccagctgtggcaagacatggtgactttgcctcccaagctaccacttcatataaa
gaattggacagtccatcccattggtggatacagcccattgatacgagacattattcgtat
gatatacaggcatttaatgatgaaatacaacaacaccttacaacacaagaggatgaggca
cttttatctgaaataaaggcacgctttcacgcgcagtatacgtatcaaaaatcaacaaga
aaacgctctaaaacgtcggtcagtgaaattaaacgtttagaaaacttacagcgtcaggag
gagccagaatattattttgctactccagctaagcggacttcaacttctattgcaccacga
ccaacctttttacaggatcaacagctaacaggcacggaaataggaacggctgtacataca
gtgatgcagcatattccacagtttggctttgatactattgaagctgtaaaaggctttgta
gcaaatttagtagcaaaacagctactaacagaggcagagggaaaagtggttccgataaag
aaagtttatcatttctttcataccgaaattggacaacgctttaagcaggcaagacagata
cgtagagaaatgccatttactattagtagagtagatgaagatggggatgctcaaatcgtc
caagggattatcgattgtttgtttgaggatgaatatggtaactgggtcttgctagattac
aagacagaccgcatcctcccacattttgcaaaggagcccgccctgacaaaggaaataatg
gggcgttatgctgttcagcttcgtgtttatagtgaagctattgaatcgattttacaaatt
aaagtaagtgaaaaagtgctgtatttattcgataatgaacaaactgtacaggcataa
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