Lysinibacillus sphaericus: Bsph_1593
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Entry
Bsph_1593 CDS
T00656
Name
(GenBank) DNA polymerase III polC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lsp
Lysinibacillus sphaericus
Pathway
lsp03030
DNA replication
lsp03430
Mismatch repair
lsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bsph_1593
03430 Mismatch repair
Bsph_1593
03440 Homologous recombination
Bsph_1593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsp03032
]
Bsph_1593
03400 DNA repair and recombination proteins [BR:
lsp03400
]
Bsph_1593
Enzymes [BR:
lsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bsph_1593
DNA replication proteins [BR:
lsp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bsph_1593
DNA repair and recombination proteins [BR:
lsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bsph_1593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
HHH_3
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACA39191
UniProt:
B1HR00
LinkDB
All DBs
Position
1678744..1683150
Genome browser
AA seq
1468 aa
AA seq
DB search
MSYVEDKLEYEAYMDCLLLKVGVDKLEQQQEARTRFRMLLQQLELTDDVYMSFFEEGELS
RLTVHKKDRLWHFTIQLRDILPFPLYQLFRTHLTDKFSAIAQVYTTIETQEKSVTEELVQ
GYWLNVVEQIDEMAPTLKNCLISQVPMWNGQKITLACMQEMEFMMLKTKYADKLADSYCQ
FGFPKMVIDFVLQEQTEEMIAAQEAFMEQKRMEEAALSQQAMQDFQKREQEKKDNPAIAN
LGDRPFQLGMHIKDDEIMEIKRIVEEERRVIVEGFVFDTEIKVLKSGRSLLQIKITDYTD
SIIVKMFSRDNDDAELMQHLKKGMWVKVRGSVQTDTFIRDLIVMANDINEIKKETRQDLA
PEGEKRVELHLHTPMSQMDAVTPVDRLVAQAAKWGHPAVAITDHAVVQSFPEAYAAGKKH
GIKVIYGLEANLVDDGVPIAYAPEHRLLADATYVVFDVETTGLSTAYDTIIELAAVKIKD
GHVIDKYESFANPHHPLSATTIELTGITDDMVRHAPEVEQVIKEFHAFIGDGIVVAHNAS
FDIGFLYTGYKKFGLEGTTHPVIDTLELARLLYPTMKNHRLNTLCKKFNIELTQHHRAIY
DTEATGYLLLQLLKDADELVIKYHDDFNKHIGGGDAYKKGRPMHCTILAVDNAGLKNLFK
IVSHSHTKTFYRVPRVTRAVLEQYREGLLVGSGCSNGELFETMMNKSPEEAEQVAKFYDY
IEVQPKAVYAPLIERNVVRDEWTLEDIIRKLVKLGKKLDKPVVATGNVHYLDPTDAMFRQ
ILVGSQGGANILNRSKLPEVHFRTTDEMLKEFDFLGPDLAKEVVVTNAQKVADSIGDVKP
IKDDLYTPKIEGSDDEVTNLTYEMAHHIYGEELPEIVKARIEKELKSILGHGFGVIYLIS
AKLVKKSLADGYLVGSRGSVGSSLVATFMEITEVNPLPPHYVCPNCKHSEFFDDGSVSSG
FDLPNKDCSECGTPYKKDGQDIPFETFLGFKGDKVPDIDLNFSGEYQPKAHNYTKVLFGE
DYVYRAGTIGTVAEKTAYGYVKGYANDHNLHFRGAEVDRLVQGCTGVKRTSGQHPGGIIV
VPDYMDIFDFTPVQFPADAQDAEWRTTHFDFHSIHDNILKLDILGHDDPTVIRMLQDLSG
IDPKTIPTDDPVVMQIFSSPESLGVTEKQIGCKTGTLGIPEFGTRFVRQMLEDTKPSTFS
ELVQISGLSHGTDVWLGNAQELIHNGTCVLKEVIGCRDDIMVYLIYQGLEPSLAFKIMES
VRKGKGLSEEFEAEMLANKVPGWYIESCKKIKYMFPKAHAAAYVLMAVRIAWFKVHFPIL
YYAAYFTVRADDFDLIAMVQGSQMIRARIDEINLKGLDASTKEKNLLTVMELALEMCERG
MSFQKVDLYRSQASEFVIEGNTLIPPFDAIPGLGTNVAKTIVAAREDGEFLSKEDLQQRG
RVSKTLIEYMDQLGCLEGMPDANQLSLF
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctatgttgaagataaattagaatatgaggcttatatggactgcctcctcctgaaa
gtaggtgtcgataaattggaacagcaacaagaggcaagaacgagatttcgaatgcttttg
cagcaactagagttaacagatgatgtgtacatgtcatttttcgaggaaggtgagttatca
cggctaacagtccataaaaaggatagactatggcattttactattcaattgcgtgatata
ctgccatttccgctttaccagcttttccgtacccatttaacagataaattttcagcaatc
gcacaagtttatacaaccattgagacacaagagaaaagtgtaacggaggaacttgttcag
ggttattggctaaatgttgtcgagcaaattgatgagatggcaccaactttgaaaaattgc
ctcatctctcaagtgccgatgtggaatggtcagaaaattacattggcctgtatgcaggaa
atggaatttatgatgttaaaaacgaagtatgccgacaagctagcagatagctattgtcaa
ttcggttttccaaaaatggtgatagactttgtacttcaagaacaaactgaagaaatgatt
gctgctcaggaagcgtttatggaacaaaaacgtatggaagaagcggctttatctcaacaa
gcgatgcaggacttccaaaaacgagagcaggagaagaaggacaatccagctattgcgaac
cttggtgatcgtccattccagcttggtatgcatattaaagatgatgaaattatggaaatt
aaacgcattgttgaagaagaacgccgtgttattgtggaaggctttgtctttgatacggaa
attaaagtactgaaaagtggccgttctttattacaaattaaaattactgactatacggac
tctattatcgtcaaaatgttctcacgtgataatgacgatgccgaattgatgcagcaccta
aaaaagggaatgtgggttaaagttcgaggctccgtccaaacagacacatttattcgtgat
ttaattgtcatggcgaatgatattaatgaaataaaaaaagaaacacgtcaggatctggca
ccagagggtgaaaagcgagtagagctacatttgcatacaccgatgagtcaaatggacgct
gtgacgcccgttgatcgtcttgttgcacaggcagcaaaatggggtcatccagcagtagct
attacagatcatgctgttgtacaatccttcccagaagcctatgcagcagggaaaaaacat
ggcattaaagtaatttatggcttggaggctaatttagtcgatgatggtgtacctattgca
tatgccccagagcatcgcttattagcagatgccacttatgttgtctttgacgtggaaaca
accggattatccactgcttacgatacaatcattgagctggcggcagtaaagattaaagat
ggccatgtcatcgataaatatgaaagctttgcaaacccgcatcatccgctttcagcaacg
accattgaattaacaggtataaccgatgatatggttcgtcatgccccagaagtagagcaa
gtcattaaagagtttcatgcatttattggggatgggattgttgttgctcataatgcgtca
tttgatattggtttcttatatacaggctataaaaaatttggtcttgaaggaacaacacat
ccagtcattgatacattagaattagctagattactttaccctacaatgaaaaatcaccgt
ttaaatacactttgtaaaaaattcaatattgaattaacacaacatcaccgagcgatatac
gatacagaggcgacaggctatttacttttacaattattaaaagatgccgatgaattagtc
attaaataccatgatgattttaataaacatatcggtggtggggatgcctataaaaaaggt
cgaccgatgcattgtactattttagctgttgataatgcgggcttaaagaatttatttaaa
attgtttcacactcccatacaaagacattctatcgagttcctcgtgtgacacgagctgtt
ctagagcaatatcgagaaggtttattagtcggttctggttgtagtaatggtgaattattt
gaaacgatgatgaataaatcaccggaagaagccgaacaggtggcaaaattctatgattat
attgaggtacaaccgaaggcggtatatgcaccattaattgaacggaatgtcgtccgtgat
gaatggacattagaggatatcattcgaaagcttgttaagttagggaagaagctcgataaa
ccagttgtcgcaacgggaaatgttcattatttagacccaactgatgctatgtttagacaa
atacttgttggctctcaaggtggtgcaaacatcttaaatcgatccaaactacctgaggtg
cattttagaacaacggatgaaatgctaaaagaatttgatttcttaggaccagatctagct
aaagaagttgttgtgacgaatgcacaaaaagtagctgatagcattggagatgttaagccg
attaaggatgatttatatacaccaaaaattgaaggctctgatgatgaagtaaccaattta
acgtatgaaatggctcatcatatttacggtgaggagctacccgaaattgtaaaagctcga
attgaaaaagaactaaaatctatattaggacatggttttggtgtaatttatttaatttct
gcgaagctggttaagaaatctttagctgacggttatttagtaggttctcgtggttccgta
ggctcttcattagtggcaacctttatggaaattacggaggttaacccattgcctccgcat
tatgtttgtccaaattgtaagcattccgagttttttgatgatggttcggttagctcaggc
tttgatttaccgaataaagactgctcagaatgcggaacaccttataaaaaagatggacaa
gatatcccattcgaaaccttccttggctttaaaggggataaggtacccgatatcgattta
aacttttctggtgaataccagccgaaggcccataattataccaaggtattatttggtgag
gattatgtgtaccgtgcaggaacaatcggtacggtggcggagaaaacagcatatggttat
gtcaaaggctatgcgaatgatcacaacttacatttccgcggagctgaggtggatcgttta
gtgcaaggatgtacaggggttaagcgaactagtgggcaacacccagggggaattatcgta
gtacctgattatatggatatttttgatttcactccagtacagttcccagcagatgctcag
gatgcagaatggcgcacaacccatttcgacttccactcgattcatgataatattttaaaa
ctagatatacttggacacgatgatccgacagttattagaatgctacaggatttatcagga
atagatccgaaaacgattcctactgatgatcctgtcgttatgcaaatttttagttcacct
gaatcgttaggtgtaactgaaaaacaaattggctgtaagacgggaacattaggtattcct
gaattcggtactcgcttcgtacggcaaatgttagaggatacaaagccttctacattctca
gagcttgtgcaaatttccggattatctcatggaacagacgtatggctaggtaacgcacaa
gaattaattcataacgggacatgtgtcttgaaagaagtaattggttgtcgtgacgatatt
atggtgtatttaatttaccaaggtctagagccatcgttagcatttaaaatcatggagtct
gtacgtaaagggaaaggcttatcagaggaatttgaagcagagatgctcgccaataaagta
ccaggatggtatatcgagtcatgtaaaaagataaaatatatgttcccgaaagcccatgct
gccgcatacgtattaatggcggttcgtattgcttggtttaaggtccattttccaatcctg
tactatgcagcatatttcacggtacgtgcagatgactttgatttaattgctatggttcaa
ggttcacaaatgattcgggcccgtattgacgaaatcaatttaaaaggtctagatgcctct
acaaaagaaaagaacttattaacagtgatggagctagcactggaaatgtgtgagcgaggc
atgagcttccaaaaagttgacttgtaccgctcacaggcaagtgaatttgtcattgaaggc
aatacattaattccaccttttgatgcaatcccaggacttggtacgaacgtagccaaaacg
atagtggctgctcgagaagatggagagtttttatcgaaggaagatttacagcaacgcggt
cgtgtttcgaaaacactaatcgaatacatggatcagttgggctgtttggaaggaatgccg
gatgctaatcagctatcactcttttaa
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integrated database retrieval system
