Lysinibacillus sphaericus: Bsph_1652
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Entry
Bsph_1652 CDS
T00656
Symbol
ymcB
Name
(GenBank) UPF0004 protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
lsp
Lysinibacillus sphaericus
Brite
KEGG Orthology (KO) [BR:
lsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsp03016
]
Bsph_1652 (ymcB)
Enzymes [BR:
lsp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Bsph_1652 (ymcB)
Transfer RNA biogenesis [BR:
lsp03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Bsph_1652 (ymcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
DUF3079
Dor1
Motif
Other DBs
NCBI-ProteinID:
ACA39250
UniProt:
B1HR59
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All DBs
Position
1743600..1745144
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AA seq
514 aa
AA seq
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MNEEQRLANQQVNQPKKEDKPEKDYSKYFEKVFTAPSLKDAKKRGKEDVKYHKDFSIDEQ
FAGMGKDRTFYIRTYGCQMNEHDTEVMAGIFMQLGYTPTEIIEEADVVLLNTCAIRENAE
NKVFGELGFLLKYKRKNPEMLIGVCGCMSQEESVVNKILRSYPHVDMVFGTHNIHRLPNI
LKEAYMSKEMVVEVWSKEGDVIENLPKKRLGSIKAWVNIMYGCDKFCTYCIVPYTRGKER
SRRPEEIIAEVRELAAAGYQEIMLLGQNVNAYGKDFEDIEYRLGDLMDALRKIDIPRIRF
TTSHPRDFDDHLIEVLAKRGNLVEHIHLPVQSGSNDILKIMARKYTREHFLTLVEKIKAA
IPEVTLTTDIIVGYPNETEEQFEETLSLYREVGFEAAFTYIYSPREGTPAAKMVDNVPEE
VKKERLQRLNEVVGEYSRKALERLNGEVVEVLVEGTSKRRDDVLAGYTRKNRLVNFKGPA
EVIGQLVKVKIIETTSYSLTGEFLEVVKNEKVEA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaggaacaacgcttagctaatcaacaggtcaatcaaccaaaaaaagaagacaag
cctgaaaaggattacagtaaatattttgagaaggtctttacggcaccttccttaaaagat
gctaaaaaacgtggcaaagaagatgtgaaataccataaggattttagcattgacgaacaa
tttgcaggaatgggtaaagatcgtactttttacattcgtacttatggctgccaaatgaat
gagcatgacacagaagtaatggctggtatttttatgcagctgggttacacaccaactgaa
ataattgaagaggctgacgtggtcttgctgaatacatgtgccattcgagaaaatgctgaa
aacaaagtatttggagaacttggtttcctgttgaaatataaacgaaaaaacccagagatg
ctaatcggggtttgtggctgtatgtcgcaagaggaatctgttgttaataaaattttaaga
agctatccacatgtcgatatggtttttggaacgcacaatattcaccgcctaccaaacatt
cttaaggaagcttacatgtcgaaagagatggtcgtagaagtttggtcaaaagaaggcgat
gtgattgaaaatctgccgaaaaaacgccttggttccattaaagcatgggttaatattatg
tatggttgcgataaattctgtacgtattgtatcgtaccgtatacacgtggaaaagagcgg
agtcgtcgtccagaggagatcattgctgaggttcgagagctagcggcagcgggctatcaa
gagatcatgttgcttggtcaaaatgtcaacgcttacgggaaagactttgaggatatcgaa
tatcgtcttggtgatttaatggatgctttaagaaaaattgatattccaagaattcgtttt
acaacgagtcaccctcgagattttgatgatcatttaatcgaagtacttgcaaaacgtggt
aatttagtagagcatattcatttaccagtacaatctggctctaatgacattttaaaaatt
atggctcgtaaatatacacgtgagcatttcctgacattagtagaaaaaattaaggctgcc
attcctgaagtaacattaacgacagatattattgttggctacccaaatgaaacagaggaa
caattcgaggaaacgctttccttataccgtgaagttggctttgaggcagcatttacgtat
atatattctcctcgtgaagggacaccggctgcaaaaatggtcgataatgtacctgaagag
gtgaaaaaggaacgacttcaacgtttaaatgaagttgtgggtgagtattctcgtaaagcc
ttagagcgtttaaatggtgaggttgtcgaagtgttagttgaaggaacaagtaaacgacga
gatgatgtgcttgcaggctatacacgtaaaaatcgtttggtcaattttaaaggaccagca
gaagtaattggtcaattagtaaaggttaaaattatcgagactacatcttattcacttact
ggtgagtttttggaagtcgtaaaaaatgaaaaggtggaagcgtaa
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