Lysinibacillus sphaericus: Bsph_1906
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Entry
Bsph_1906 CDS
T00656
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lsp
Lysinibacillus sphaericus
Pathway
lsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bsph_1906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsp03019
]
Bsph_1906
03400 DNA repair and recombination proteins [BR:
lsp03400
]
Bsph_1906
Enzymes [BR:
lsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bsph_1906
Messenger RNA biogenesis [BR:
lsp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bsph_1906
DNA repair and recombination proteins [BR:
lsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bsph_1906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
AAA_22
DEAD_2
RepB_primase_C
Motif
Other DBs
NCBI-ProteinID:
ACA39498
UniProt:
B1HT82
LinkDB
All DBs
Position
1986014..1987456
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AA seq
480 aa
AA seq
DB search
MELEELLHKHFGYSSFRPGQREVIEAILQEKDVMALLPTGMGKSLCYQLPAYILEKPVLI
VSPLLSLMQDQVEELKRFGEKRVVALNSFLSITEKRYVLHYLEQYRFIFTSPEMLLQQQV
QEKLAQVKLGLIVVDEAHCISQWGYDFRPDYLRIGEWLSRHNRPPLLALSATATRKVMQD
IRETLSLKDPFEFMYNVDRPNIQLGRIVLEDKADKASWLMRHVKATAGPGILYVSSRKRA
QQYSEAFLQVGIRTAAYHAGYGAEDRQFIQQQFIDGELDWIVATNAFGMGINKQDIRQVI
HESMPANIANYMQEIGRAGRDGEPAHAILLYCDGDEELAKFVVTGDLPSSQHVDRYEELL
SQQVLPAQMLKNGELGETAFRVLDYWMQQETKEQVKARLNQLALEKYRAVDEMLKIIQTK
DCIREHLVGYFGQKLQKKPEKCCENCGIHYDEIKKVRLTTEKKIEMISWERRLQLLLLGN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaactggaagaactattgcataaacattttggttattcatcatttcgaccagggcaa
agggaagtcattgaagcaatacttcaagagaaagatgtaatggccttattgccaacagga
atgggaaaatcactttgctatcagctaccagcttatattttagaaaagccagtgctgatt
gtatctccattgctttcattaatgcaagatcaggtagaggaattgaaacgttttggggaa
aagagggttgtcgctttaaattcttttttatccatcacagaaaaaagatatgtattacat
tatttagaacaataccgtttcatttttacctcgccagagatgctacttcagcagcaggtt
caagagaaactagcacaggtaaaattaggtttaatcgtagtggacgaggcacattgtata
tcgcaatggggctatgatttccgaccagattatttacggataggtgagtggctatcgagg
cacaatcgacctccattgctagcactatccgccactgcaacaaggaaggttatgcaagat
attcgagaaacattatcgttaaaggacccatttgaatttatgtataatgttgatcggccc
aatattcaattaggacgcattgttctggaggataaggcggataaagcgagctggcttatg
cgacatgtcaaagcaactgctggcccaggtatactgtatgtttcctcacgcaaacgagcg
caacagtatagtgaggcatttttacaagtaggtattcgtactgcagcctatcatgcaggc
tatggggctgaggatcgccaatttattcagcagcagtttattgatggagaattggactgg
atagtggcaacaaatgcttttggtatggggattaataaacaagatattcgtcaggtcatt
catgaatcaatgcctgctaatattgcaaattatatgcaggaaattggtcgagcaggtcga
gatggtgaacctgcacatgccattttactctattgtgatggtgatgaagagctggcgaag
ttcgttgtgacaggtgaccttccgagttctcaacatgttgatcgctatgaggagcttctt
tctcagcaagtactaccagcacagatgttaaaaaatggagaattaggagagacagcattt
cgtgtgttggactattggatgcaacaagaaactaaggagcaagtaaaggctcgcctcaat
caattagccctagaaaaataccgtgcagtcgatgaaatgttgaagattatacagacaaaa
gactgtattcgtgaacatcttgtcgggtatttcgggcaaaaattgcaaaaaaaaccggaa
aagtgttgtgaaaattgtggaatccattatgatgaaatcaagaaagtacgcttaacaaca
gagaaaaaaatagaaatgatttcgtgggaacgtcgattgcagctactattactgggtaat
tag
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