Lysinibacillus sphaericus: Bsph_2840
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Entry
Bsph_2840 CDS
T00656
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lsp
Lysinibacillus sphaericus
Pathway
lsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bsph_2840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsp03019
]
Bsph_2840
03400 DNA repair and recombination proteins [BR:
lsp03400
]
Bsph_2840
Enzymes [BR:
lsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bsph_2840
Messenger RNA biogenesis [BR:
lsp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bsph_2840
DNA repair and recombination proteins [BR:
lsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bsph_2840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
T7SS_ESX_EspC
DUF4953
Motif
Other DBs
NCBI-ProteinID:
ACA40373
UniProt:
B1HMK7
LinkDB
All DBs
Position
2800816..2802588
Genome browser
AA seq
590 aa
AA seq
DB search
MEQARQMLQHHFGYGAFRQGQAQIIEQTLHGQSSLCVMPTGGGKSICYQIPALILEGLTI
VISPLISLMQDQVEALRAANIPAAYINSTLTAQEVNETMQLASAGYLKLLYIAPERLESA
SFLQALSYLSVPLIAVDEAHCISQWGHDFRPSYRSIQKLFTLWPQKPTVLALTATATPAV
CEDIRHLLNIDENATVMTGFTRDNLALSVLIGENKERYIKNYLQKNKQEVGIIYAATRKA
VDAIYDMLSRTGEAVAKYHAGLSEELRMAEQERFLKDEARIMVATNAFGMGIDKSNVRFV
LHYQMPRNMESYYQEAGRAGRDGLPSACILLYASGDVQTQRFLIEQSQDEARIPQELAKL
QTMVDYCHTEGCLQNAILAYFGEVQEEPCGRCSNCNDGRTMMNVTEDAQKVLACVVRMGQ
KFGKTMVAQVLIGSKNQKMTEFGFARLSTYGILKGHYSSKDVSNFIEFLIAEGLLAVKHG
TYPTIYVSAEGKEVLLGQRQVMRKEAVAVKKLVDNDPLFEHLRVLRKEIADEEKVPPFVV
FSDKTLRELCDKKPAELDDLRHISGIGEVKSDKYGKRFFEALQSFLETPI
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagcaagacaaatgctacagcatcattttggctatggagccttcaggcaagga
caagcccaaattattgaacaaacattacatggacaatcaagcctgtgtgtgatgccaaca
ggtggtgggaaatccatttgctatcagattcctgcgttaatacttgaggggctgacaatt
gtcatatcgccccttatttctttaatgcaagatcaggtggaagctttacgagcagctaat
attcctgctgcctatataaatagtacattaacagcacaagaagtgaatgaaacgatgcag
ctagctagtgctggttatttaaaactactttatatcgcacctgaacgactggaaagtgct
tccttccttcaagcattgtcctatttatccgtcccattaattgcggtagacgaagctcac
tgtatttcacaatggggtcatgattttagaccaagttatcgctccattcaaaagcttttt
acactgtggccgcagaagccaactgtattagctcttaccgccactgcgacacctgctgtt
tgtgaggatattcggcatttattaaacattgacgaaaatgcaacagtgatgacaggcttt
acgcgtgataacttggcactttcggtgctaattggagaaaataaagaacgttatattaaa
aattacttacagaaaaataaacaggaagtcggtattatctacgccgccacacgaaaggcg
gtagacgcgatttatgacatgcttagtcgtactggagaagcagtagccaaatatcatgcg
gggctatcagaggaactacgtatggcagagcaggagcgatttttaaaagatgaggcgcgt
attatggtggctaccaacgcctttggcatgggaatcgataaaagcaatgtgcgctttgtc
ctgcactatcaaatgcctcggaatatggagagctattaccaagaagcagggagagctggt
cgagatggtcttccaagtgcttgtatattattgtatgcctccggtgatgttcaaactcag
cgttttcttattgagcaatcgcaagacgaggcacgaataccacaggaattagcgaagctc
caaacaatggtcgactattgccatacagagggctgtcttcaaaatgctattttagcgtat
tttggtgaagtacaagaggagccttgtggtcgctgtagtaattgtaatgatggtcgtacc
atgatgaatgtgacagaggatgcacaaaaggtactggcttgtgttgtacggatgggccaa
aaattcggcaagacgatggtagcacaagtactcatcggctccaaaaatcaaaaaatgacg
gaatttgggtttgctcgtttatccacctatggtattttgaagggacattattcgtctaaa
gatgtctcgaactttattgagtttctaattgcagagggtttattggctgttaaacacggc
acatatccaactatttatgtgtcagccgagggtaaagaagtactacttggccaacgacag
gtcatgcggaaagaagctgtagcggttaaaaaactggtagataatgatccattatttgaa
catttacgtgtgttgcgaaaagaaattgcagatgaagagaaagtaccgccatttgtagta
ttctcggataaaacattgcgtgaattatgtgacaagaagccagcagaattggacgattta
cgccacataagcggcattggtgaagtgaaatctgataaatacggcaaacgtttctttgag
gcgttacaatcgtttttagaaacacccatctag
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