Lysinibacillus sphaericus: Bsph_3677
Help
Entry
Bsph_3677 CDS
T00656
Name
(GenBank) Probable ATP-dependent RNA helicase yqfR
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lsp
Lysinibacillus sphaericus
Brite
KEGG Orthology (KO) [BR:
lsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsp03019
]
Bsph_3677
03009 Ribosome biogenesis [BR:
lsp03009
]
Bsph_3677
Enzymes [BR:
lsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bsph_3677
Messenger RNA biogenesis [BR:
lsp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bsph_3677
Ribosome biogenesis [BR:
lsp03009
]
Prokaryotic type
rRNA helicases
Bsph_3677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Helicase_RecD
AAA_19
DUF7117
Motif
Other DBs
NCBI-ProteinID:
ACA41161
UniProt:
B1HTF7
LinkDB
All DBs
Position
complement(3585345..3586649)
Genome browser
AA seq
434 aa
AA seq
DB search
MMSKYTDYNFQPFLQDAIAELGFTEPTPIQKEIIPLILKGKSAIGQAHTGTGKTHSFLIP
IVQRIDVEKQEVQAVITSPTRELAQQIYDALNQLIEGTAIQAKLFIGGTDKQRSIDKLKT
QPQIVVGTPGRIRDLVSAQALFVHTAPILVVDEADLAFDMGFIEEIDGFASQMPEKLEMF
VFSATIPEKLQPFLKKYMDAPVHVHMNDKRPVAEGIDFMLVPVRSKSRNKRLLEVIEGIN
PFLAVIFTNTRKSAEHVAGYLNEHGIRCGQIHGDLSPRDRKKMMKQIRDLEYQYIVATDL
AARGIDIQGISHVINYEIPEDLEFFIHRVGRTARAGNKGTAITLFEPSEEDAVVRVEKMG
IPFVQMDVKNGEWSELKERHARKNRVKQENEIDVKAKALVRKPKKVKPGYKRNMKWEMEK
IKKRERRLKARGKK
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaaaatatactgattataattttcagccatttttgcaggacgccattgcagaa
cttggctttacagaaccgacaccaattcaaaaagaaattattccattaatattaaaaggg
aagagtgccattggacaggcacatacaggaacagggaaaacacatagttttttaattccg
attgttcaacgtattgatgtagagaaacaggaagtacaggccgttattacttctcctaca
cgtgagctggcacagcaaatttatgatgcattgaatcaattaatagaaggaacagctata
caggcaaaactttttattgggggtacggacaaacaacgctctattgataagttaaaaacg
caacctcaaattgttgttggaacacctggacgtattcgtgaccttgtttcagcacaagcg
ttatttgtgcatacggcaccaattctagttgttgatgaagcagatttagctttcgatatg
ggctttattgaggaaattgatggatttgcatctcaaatgccagagaaacttgaaatgttc
gtattttcagcaacaatcccagaaaagctacagcctttcttaaaaaaatatatggacgca
cctgtccatgtacacatgaacgataaacgacctgtggcagagggcattgattttatgctt
gtacctgttcgttctaaatcacgtaataaacgtttattagaagtcattgaaggcatcaat
ccatttttggctgttatttttacaaatacacgtaaatcggctgagcatgttgctggttat
ttaaatgagcatggtatccgttgtggacaaatccatggtgatttaagcccacgtgatcgt
aagaaaatgatgaagcaaattcgtgatctcgaatatcaatatattgttgcaacagatttg
gcggcacgtggaattgatattcaaggaatttctcatgtcattaactatgaaatccctgag
gatttagaattctttattcaccgtgtaggacgtactgctcgtgcaggtaataaaggaaca
gccattacattatttgagccatctgaagaggatgcagtagtacgtgtggaaaaaatgggt
attccatttgtgcaaatggacgttaaaaatggagaatggtctgagttaaaagagcgtcat
gcccgtaaaaatcgtgttaaacaagagaatgaaatagatgtgaaagcgaaggcgttggtg
cgtaaacctaaaaaggtgaaaccaggctataagcgtaatatgaaatgggaaatggaaaaa
attaaaaaacgcgaacgccgcttaaaagcgagaggaaaaaaataa
DBGET
integrated database retrieval system
