Lysinibacillus sphaericus: Bsph_4134
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Entry
Bsph_4134 CDS
T00656
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lsp
Lysinibacillus sphaericus
Pathway
lsp03030
DNA replication
lsp03430
Mismatch repair
lsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bsph_4134
03430 Mismatch repair
Bsph_4134
03440 Homologous recombination
Bsph_4134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsp03032
]
Bsph_4134
03400 DNA repair and recombination proteins [BR:
lsp03400
]
Bsph_4134
Enzymes [BR:
lsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bsph_4134
DNA replication proteins [BR:
lsp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bsph_4134
DNA repair and recombination proteins [BR:
lsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bsph_4134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
ACA41595
UniProt:
B1HX19
LinkDB
All DBs
Position
complement(4001677..4004739)
Genome browser
AA seq
1020 aa
AA seq
DB search
MHTSADLLKSTIRLEQLIPFLLEQKTQACAIVNTKLYGLLPFCKAMQQAKIHAVMGLSVN
VQWHDTTLPLVLYAQSQEGYQQLLKISSAASIREDGVLPWKWLEGYAAGCLALLSSDDLA
ELKDWHGVVSALAHLFQHHFYMGITRPGGVALANENELVEWCEGQRIPLVAVQSCYFLRP
EDHFAYEVARAIDTGDKLGDTMLTAKLQGYFAPTAQEWQSWFTDRPEWLETCGQMLASCR
AIIPEMSVQMPKFPVPVGETAESLLVKEAFSGLEERFNQLDIPYGYRERLRYELEIICSM
GFADYFLVVADFMRFAKDNRILTGPGRGSSAGSLVAYSLAITQVDPLAYGLLFERFLNPE
RISLPDIDIDFVDSKRHQVIQYVAQKYGKGNVAQIITFGTLSAKAVARDVARVFGFGAEV
LEKISKMIPNKPGITLQKALEESYDLQEWLSEDHQHQRWFEVAQKLEGLPRNSSTHAAGI
VIAPSSLVNTVPIEDGHEGIYCTQWPMGDVEASGLVKMDFLGLRNLTILEQIRWSIYKAG
GPWIDFERIPMHDEKTFQLLQSGDTSGIFQLESEGMKQALRDIHPTQFLDIVAVNALYRP
GPMEFIPVYARRKAGKELVVMPHPVLEPILQETFGVIVYQEQIIKIASVLAGFSMGQADL
LRRAVSKKNRQVLEEQQVTFVQGALKQGYDQHVATEVYELIVRFADYGFPKSHAVAYSII
SYQMAYLKAHFPQSFYAALLSNATGNVDKIQQLVQEAKDKGIPFYPPSLKDSTKYFTVEQ
EGIRYSLAGIKGVPHTFIESINTLRQTNPQALYNLFDLAVALSAQHFKPKVIESLIYAGA
LDYLEKDRAVLIMTIDAALKHAELLRPNEDIDISTATEFNFGKPKYMQVDDMPQKEKLIH
EKESLGFYISAHPVTQERPYWADVNCTSRELKQMRDGTYVKMIGVMEEVKKIRTKKGEQM
AFVQLQDEHGSVSATLFPQVFQFVQDLLVEDEILVVEGNLERRFGKPQIKVKHAQATKKI
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgagcgcggatttattgaaaagcacaattcggcttgagcaattgattcctttt
ttactagaacaaaagacgcaggcctgtgcaatcgtaaatacgaaattgtacgggcttttg
cctttttgtaaagccatgcagcaagcaaaaatacatgccgtcatggggctttctgttaat
gtgcaatggcatgacacaacgcttcctcttgtactgtatgcacagtctcaggagggctat
caacagttattgaaaattagcagtgcggcttcaattagggaagacggagtgctaccttgg
aaatggctagagggctatgcagcaggctgcttggcattgctttcatccgatgatttagcc
gaattaaaagattggcatggagtagtatctgccttagctcatctctttcagcatcacttt
tatatgggaattaccagacctggaggggtggcgctagctaatgagaatgagcttgtagag
tggtgtgagggacagaggattccacttgtagctgttcagagctgttattttttacgacct
gaagatcattttgcatacgaagtagcaagagcaatcgatacgggagacaagcttggagat
acgatgctaacagctaaattacagggttattttgcaccaacagcacaagagtggcaaagt
tggtttactgatcgaccagaatggcttgagacctgtggacaaatgcttgctagctgtcgt
gctatcattcctgaaatgtctgtacaaatgcctaaatttcctgtgccagtaggtgaaaca
gctgagagtttacttgttaaagaagcattttctggattagaggaacgatttaaccagctg
gacattccgtatggttaccgagaaagactacgatatgagcttgaaataatatgttcaatg
ggcttcgctgattattttttagttgtagctgattttatgcgctttgccaaagacaatcgc
attttaactggaccaggtcgtggttcctccgctgggtcactagttgcctatagtctagct
attacgcaagtagatccactcgcctatggtttattatttgaacgatttttaaaccctgaa
cggatatccttacctgatattgatattgattttgtcgatagtaaacgacatcaagtgatt
cagtacgttgcacaaaaatatggtaaaggcaatgtcgcccaaatcattacattcggtaca
ttgtctgccaaagcagtggctcgagatgtcgcaagagtatttggttttggtgcagaggta
ttagagaaaatttcaaaaatgattccgaataaaccggggattacattgcaaaaggcttta
gaagaatcatatgatttacaggagtggctctctgaggatcaccagcatcagcgttggttc
gaagtagcgcaaaaattagaaggtctgcctagaaattcctctacccatgcggcaggcatc
gttattgctccttcctccttagtcaatacagtccctattgaggatggacatgaaggcata
tattgcacacaatggccgatgggtgatgtagaggcgagtgggcttgtcaaaatggatttt
ttaggtttacgcaatctaactattttagagcaaattcgttggtccatttataaagcgggt
ggaccttggattgattttgaacgaattcctatgcatgatgaaaaaacttttcaattattg
caaagtggtgatacatcaggtattttccaattagaatcggaaggaatgaaacaagcatta
cgagacattcatcctacacaatttttagatattgtggctgtgaacgcactttatcgtccg
ggtccaatggaatttatacctgtctatgctagacgaaaagccggtaaagaattagtggtt
atgcctcaccctgtgttagagccaattctacaagagacttttggagttattgtctatcaa
gagcagattatcaagattgcctctgtgctagcaggattttcaatgggtcaagcagattta
cttcgccgtgccgttagcaaaaaaaatcgtcaagtcctggaggagcaacaggttaccttt
gtacaaggggcattaaaacaaggctatgatcagcatgtggcgacagaggtgtatgaatta
attgtccgctttgctgattacggatttcctaaaagtcatgctgtagcttatagtattatt
tcttatcaaatggcttatttaaaggcacatttccctcaaagcttttatgctgcattatta
tctaatgcaacgggaaatgtagataaaattcaacagctagtacaagaggccaaagacaaa
ggtatcccgttttatccaccttcattaaaggacagtacaaaatattttacggttgagcag
gaggggatccgttatagtttagcagggattaaaggcgtccctcatacttttattgaaagt
atcaatacattgcgccaaacgaaccctcaggcattatataacctttttgatttagctgtg
gcattaagtgcacagcattttaaaccgaaagtaatagaatcattaatttatgctggagcc
ctagattatctagaaaaggaccgtgcagtactaatcatgacaatagatgctgccttaaaa
cacgctgaactactacggccaaatgaggatattgatatatcaactgctacagaatttaac
tttggaaagccaaaatatatgcaagttgatgatatgccacaaaaggaaaaattgatacat
gagaaggaaagtttaggcttttacatttctgcccatccggttacgcaagaaagaccatat
tgggctgatgtgaattgtacaagtcgtgagttaaagcaaatgcgagatggtacgtatgtg
aaaatgattggtgtcatggaagaagtaaaaaaaattcgtaccaaaaaaggggagcagatg
gcctttgtccagttacaggatgagcatggatctgtttctgctacattatttccacaagtt
tttcaattcgttcaagatttgttagtagaagatgaaattctggttgtagaagggaatcta
gaaagacgttttggaaaaccgcaaattaaagtaaaacatgcgcaagcgacgaaaaagata
tga
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