KEGG   Lucilia sericata (common green bottle fly): 119600213
Entry
119600213         CDS       T08270                                 
Name
(RefSeq) sm-like protein LSM4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
lsq  Lucilia sericata (common green bottle fly)
Pathway
lsq03018  RNA degradation
lsq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lsq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119600213
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119600213
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lsq03019]
    119600213
   03041 Spliceosome [BR:lsq03041]
    119600213
Messenger RNA biogenesis [BR:lsq03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     119600213
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     119600213
Spliceosome [BR:lsq03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    119600213
SSDB
Motif
Pfam: LSM DUF2020
Other DBs
NCBI-GeneID: 119600213
NCBI-ProteinID: XP_037806237
LinkDB
Position
Unknown
AA seq 152 aa
MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDAQTKSRNRAEMNKGRGGGQGGAQNPNQRVRGVNRNNFN
NRINQGTTAGNNGPRQNAQNIRSVTQPNKLRK
NT seq 459 nt   +upstreamnt  +downstreamnt
atgctaccgctatcacttcttaaaacagcacagagtcacccaatgctcgtggaactaaaa
aatggagaaacttataatggacatttggttagttgtgattcttggatgaatattaattta
cgtgacgttatttgcacttctaaggacggtgaccggttctggcgcatgcccgaatgttat
atacgtggcagtacaattaaatatctccgcattccagacgaagtaattgacatggtaaaa
gaagatgctcaaactaagtcaagaaatcgagcagaaatgaataaaggccgaggaggaggt
caaggcggtgcacaaaatccaaaccaacgcgtacgtggtgttaatagaaataattttaat
aacagaattaatcaaggaacaaccgctggaaataatggtccaagacagaatgctcagaat
attcgatccgtcacacagccaaacaaattaagaaaataa

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