Lucilia sericata (common green bottle fly): 119600406
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Entry
119600406 CDS
T08270
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03013
Nucleocytoplasmic transport
lsq03015
mRNA surveillance pathway
lsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119600406
09122 Translation
03013 Nucleocytoplasmic transport
119600406
03015 mRNA surveillance pathway
119600406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsq03019
]
119600406
03041 Spliceosome [BR:
lsq03041
]
119600406
Enzymes [BR:
lsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119600406
Messenger RNA biogenesis [BR:
lsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119600406
Spliceosome [BR:
lsq03041
]
Complex C
Other components
EJC/TREX
119600406
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119600406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
MoaE
AAA_19
Motif
Other DBs
NCBI-GeneID:
119600406
NCBI-ProteinID:
XP_037806538
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MADNDDLLDYEDEEQTETTVAETQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTRE
LAFQISKEYERFSKYMPTVKVGVFFGGLSIQKDEESLKNVTPHIVVGTPGRILALIRNKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKILNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggccgataatgatgatcttttagattacgaggatgaggaacaaaccgagaccaccgtt
gccgaaacacaagaggcacctaaaaaggatgttaaaggtacctacgtatctatacacagt
tctggtttccgtgatttcctcttaaagcctgaaattctaagagctattgttgattgtggt
tttgagcatccctcggaagtacaacatgaatgtattccccaggctgttctaggcatggac
attctctgccaggctaaatctggtatgggtaaaactgcagtatttgtgcttgccacattg
caacagctggaacccactgagaatgttgtttatgttctagtcatgtgtcacactcgcgaa
cttgcattccaaattagtaaggaatacgaacgtttttccaaatatatgccaacagttaag
gttggagttttctttggtggcttatccatacaaaaagatgaagaatctttgaaaaatgtt
acacctcatattgttgtcggtacccctggtcgtattttggctttgattcgcaataagaag
ttgaacttgaagcatttgaaacattttattctggatgaatgtgataaaatgttggaacaa
cttgatatgcgtcgcgatgttcaggagatattccgcagtacaccacatggaaaacaagtt
atgatgttttccgctactctaagcaaagaaattcgaccggtttgcaaaaaattcatgcaa
gatcccatggaagtgtatgtcgatgacgaagccaagttgacgttgcatggtctgcaacag
cattatgttaagttgaaggaaaatgaaaagaacaaaaaactatttgaacttttggatgta
ctagagtttaatcaagtcgttattttcgttaaatctgtgcaacgttgcatggctttggca
caattgctaacagaacaaaatttccctgctattggtattcatcgtggtatgacacaggag
gagcgtttaaatcgttaccaacaattcaaggatttccaaaagcgtatactagtggccacc
aatttgttcggtcgtggtatggatattgaacgtgtcaatattgtcttcaactatgacatg
cccgaggactccgacacctatttgcatcgtgtggcccgtgctggtcgttttggtaccaag
ggtttggccattacctttgtttcggatgaggctgatgccaagattttaaatgaagtccag
gacagatttgatgttaatattaccgaattgcccgatgaaatcgatctgtcatcttacatt
gagggccgataa
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