Lucilia sericata (common green bottle fly): 119600682
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Entry
119600682 CDS
T08270
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119600682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsq03021
]
119600682
03019 Messenger RNA biogenesis [BR:
lsq03019
]
119600682
Transcription machinery [BR:
lsq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119600682
RNA polymerase I system
119600682
Messenger RNA biogenesis [BR:
lsq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
119600682
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
KOW
Spt5-NGN
KOW5_SPT5
KOW6_SPT5
KOWx_SPT5
KOW2_Spt5
Spt5_N
KOW7_SPT5
CTD
GPKOW_C
PAS_6
Motif
Other DBs
NCBI-GeneID:
119600682
NCBI-ProteinID:
XP_037807037
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MSDSEESNISDSGSEDGSVGSNKSQKSAHSRSRSPVRSRSGTRSRSGSRSQSRSRSRSRS
RSRSVGSESGSDNSVRGHKQRSRDDEEEEDDVDGDDVDSEEYEEDEDDRPRKKKKKDRFG
GFIIDEAEVDDEVDEDDEWEEGANELGIVGNEIDELGPTARDIEIRRRGTNLWDTQREDE
IEEYLRKKYADESIAKRHFGDGGEDMSDEITQQTLLPGIKDPNLWMVKCRIGEEKATALL
LMRKFLTYLNTDEPLQIKSVVAPEGVKGYIYIESYKQTHVKTTIENVGNLRMGKWKQEMV
PIKEMTDVLKVVKEQVGLKIKQWVRLKRGLYKDDIAQVDYVDLAQNQAHLKLLPRIDYTR
MRGALRSTASESDDSKRKKKRRPPAKPFDPEAVRAIGGEVHSDGDFLLFEGNRYSRKGFL
YKNFTMSAIQAEGVKPTLAELERFEEQPEDVNLEIVTGAKDDPTAGHSFSMGDNVEVCVG
DLENLQAKIIAIDGGMITVMPKHQDLKDPLVFKANELRKYFKTGDHARVLAGRYEGETGL
IIRVEPTRVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDLVQLDAQNVGVIV
RLERENFHVLGMHSKVIECKPTALHKRRENRNTIALDADQNQIRRRDIVKVMEGPHAGRS
GEIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKSQTNNFGPLGGLGFMSPRIQS
PMHPSGGRGGRGGARGGRGGFKVTRDRELVGKTIKISGGPYKGVVGIIKDATESTARVEL
HTSCQTISVDRNHIAIVGAAGKDGSLSSYGRTPARTPGYGSHTPIYAAAGSKTPLLGSQT
PNWDSEGRTPYSSSMTPLHDGSMTPRHGAWDPNVTNTPARSNDFDYSLEEPSPSPGYNPS
TPGYQINTQFPPQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMNTPSPSSYSPNTPGGA
PNSPYNPQTPGASLESPIGDWCTTDIEVKIHTHDDVDLVGQTGIIRTVSNGVCSVFLQEE
DRSVSVVSEHLAPVPPEVGDEFKVIYGDERESVGKVVSHSNKDTSICQLNGEIKMIPTAY
LSKMKSID
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactctgaagaaagtaatatatcggacagtggttccgaagatggatccgttgga
tcgaacaagtcgcaaaagagtgcgcattcccgatcacggtcgccagtacggtccaggtcg
ggaacgaggtctagatctggatcaagatctcaatctagatccaggtcacgttctcgatcg
cgttcccgttcagtgggctcagaatccggttcggataattctgtaagaggacataaacaa
cgatcccgggatgacgaggaagaagaggatgacgtcgatggtgatgatgtcgattcggag
gaatatgaagaagatgaagacgatagaccaagaaagaaaaagaagaaggatcgttttggt
ggttttattatcgatgaagctgaagtagacgatgaggttgatgaagatgatgaatgggaa
gaaggtgccaatgagttgggtatagttggtaacgaaattgacgaattgggtccaacagcc
cgtgatattgaaataagacgacgtggtacaaatctatgggatacacaaagagaagacgaa
atcgaggaatatttaagaaagaaatatgctgatgaatctattgctaagagacattttgga
gatggaggagaagacatgtccgatgaaattacccaacaaactctgttgcctggaattaag
gatcctaatttatggatggtcaagtgtcgcattggcgaagagaaagctacagctttgtta
ttaatgcgtaaatttttaacttatctaaataccgatgaaccattgcaaatcaaatctgtt
gttgcacccgagggtgttaagggttatatatacattgaatcgtataaacaaacccatgtc
aagaccactatcgaaaatgttggtaatcttagaatgggaaagtggaaacaagagatggta
cccatcaaggaaatgacagatgtattgaaagttgtaaaggaacaagtgggtttaaagatc
aagcagtgggtaagattgaagagaggtctttacaaggatgacatagctcaggtggactat
gttgatttggctcaaaatcaagcccatttaaaattattgcctcgtattgattacacacgc
atgagaggtgcacttagatcaactgcaagcgaatccgatgatagtaaacgcaagaaaaaa
cgcaggcctcctgcaaaaccttttgacccagaagctgtgagggccattggtggtgaagtt
cattctgatggtgactttttgctgttcgaaggaaatcgctattcccgcaagggtttctta
tacaaaaactttaccatgtcagctattcaagctgaaggcgttaaaccaactctggcagaa
ttagaaaggtttgaagaacaaccagaagatgtaaatttagaaattgttactggggctaaa
gatgatcccactgctggacattcattctccatgggtgataatgttgaagtatgtgtgggt
gatttggagaatttgcaggcaaaaatcatagccatcgacggtggaatgattactgttatg
ccgaagcatcaagatttgaaggatcctttggtatttaaagcaaacgaattgcgaaaatac
tttaaaactggtgaccatgcccgtgttttggctggacgttatgaaggagaaacaggttta
attattcgtgttgaacccacacgtgtggttcttgtgtccgatttaacaaatcatgaattg
gaagtgttgcctagagatttgcaactttgctcagatgttgccaccggtgtggattgtctg
ggtcaatttcaatggggtgatttggtgcaactagacgcacaaaatgtgggtgttattgtt
cgtttggaacgtgaaaatttccatgttttgggcatgcatagcaaggttattgaatgcaaa
cctactgctctacataagaggcgtgagaacagaaataccatagcactcgatgctgatcaa
aatcaaatcagacgtcgcgatattgttaaagttatggaaggtcctcatgcgggtcgatcg
ggagaaataaaacatttatatcgcagtttagcatttttacattgtcgcatgtatacggaa
aatggtggaatatttgtgtgcaagaccagacatcttcaacttgctggtggtagcaaatca
caaaccaataattttggcccgctcggtggtttaggctttatgtctccacgtattcaatct
cctatgcatccttcgggtggacgaggaggtcgtggtggagctagaggtggccgcggtggt
ttcaaagttaccagagatcgtgaactggtgggcaaaacaatcaaaattagtggaggcccc
tataaaggtgtggtgggtattatcaaagatgctacagagagtacagcgcgtgtggaatta
catacatcgtgtcaaaccatttccgttgatcgtaatcacatcgccatagttggagcagca
ggcaaagatggcagcctctcttcgtacggacgcactccagctcgtactcctggttatggt
tctcatacaccaatttatgctgcagctggatctaagactccattattgggtagtcaaaca
cccaactgggactctgaaggtcgcacaccttatagtagttcgatgacaccgttgcatgat
ggtagcatgacgccacgtcatggagcttgggatccgaatgttacaaacacaccagctcgc
agtaatgactttgattattcacttgaagaaccaagcccaagtcctggctataatcccagt
actcctggttatcagatcaacacacagtttccaccacaaacgccaggaactctttatggc
tctgaccgcagttacagtccctttaaccctagtccaagtccagctccatcaccatatcct
gttggctatatgaacacaccatctccttctagttactcgcccaacactcctggcggcgct
cccaactcaccctataatccacaaactcctggcgcaagcttagaatcaccaattggtgac
tggtgtacaactgatattgaggtcaaaatccatacccatgacgatgttgatttagtgggc
caaactggcattattcgcactgtttctaatggtgtctgttcagttttcctacaagaagaa
gatcgcagtgtttcggttgtaagcgaacatttggcacccgttccgccagaagttggtgat
gaatttaaagttatttatggcgatgaacgtgaatcggtcggtaaagtggtatcgcattct
aataaagacaccagcatatgccagctaaatggcgaaattaaaatgataccaactgcctat
ttgagtaagatgaaatccattgattaa
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integrated database retrieval system
