Lucilia sericata (common green bottle fly): 119603932
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Entry
119603932 CDS
T08270
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119603932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsq03019
]
119603932
03012 Translation factors [BR:
lsq03012
]
119603932
Enzymes [BR:
lsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119603932
Messenger RNA biogenesis [BR:
lsq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119603932
Translation factors [BR:
lsq03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119603932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
nSTAND3
AAA_22
AAA_19
ABC_tran
PhoH
ResIII
NB-ARC
AAA_7
T2SSE
SRP54
ATPase
AAA_11
AAA_16
Motif
Other DBs
NCBI-GeneID:
119603932
NCBI-ProteinID:
XP_037812159
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MSEYRRGRGGRGGRGGGGGSGGRPPWLKGKDIGLYYRDRQRQRNNEEERNGRIKLNPSVD
IPSGVLAQVENCLQEFEKDSEDERVCDEFAQHFRNLLDINFEEFLEKSKKSVRNTLEHIN
LEVSNERLKTSLMEKEESQQYRKRYDMRQRLPAMKQRQDVLKAIEENQVVLIVGSTGCGK
TTQVPQILLDEFTNNGRGAECRIVCTQPRRISAISVAERVAYERDESLGSSVGYQIRLEN
RLPRDYGSILYCTTGILLQKMQSNPLLIGINIIILDEIHERSVESDLLMALLKKILPHRA
DLKVILMSATVSEETFCEYFNNCFTLYIEGTLFPVEVLYLEDVLQETGFTGFENLALAQN
SHGRGRRRDGGEAGRNNQYNQMISTYLPALQGKYNRQVVDTIRKYKDTEGCENLLFLEHL
IFYICENKPPGAILVFLPGFERISKLTTQLQKPSTPKHRELAQKIQVYPLHSMMPTVNQK
SIFKPAPDGMRKVILSTILAETSVTIDDVVYVINTGKTKNKDYDISQNIQTLEEQWVSKA
NTQQRKGRAGRVQPGICYNLFTRIRERLMLEVPIPEILRSKLESIILNLKLLHISNPYEF
LKTLISVPNEQAISHGLNLLKRIEALDVNDNLTPLGLHLAHLPIDPQMGKMILMSALFRC
LDPITSAAAGLSYKSPFYTPMGLEKKVDAIKRELSNNCKSDHLLIHNVIEGYREAKDNNC
HMNYCYENFLSHTTLTQIENMKRQFADLLKNSSFLESSNCCDKSSNVNSSNVPLLRAIIA
AGLYPNIAFLRQVKQVGNRCHALHKMSTPEDNRVNFHPSSINCGQTSFDSNYFVYLQKQR
SKEVYLLDATMVFPMALLIFGDGVKKGITAEKQPYISVANKYFFKCNENSSLFILRLREK
LGILLQKKALYPSPIEINSKDEKLIKAIQILLSLDDAGDLADQFLSTDDEDDGSIPSQRF
KSTI
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatatcgtagaggacgtggtggaagaggcggccgtggaggaggaggtggtagt
ggtgggcgaccaccatggctaaaaggtaaagatatcggtttgtattatcgtgatcgacaa
cgtcagcgcaataacgaagaagaacgtaacgggcgcattaaactcaacccatctgtggat
attccaagcggtgttctagcacaggttgaaaactgcctccaggaattcgaaaaggacagt
gaagatgaacgtgtttgtgatgaatttgcacaacattttcgtaatttacttgatattaat
ttcgaggaattcctagagaaatccaaaaagtctgttagaaacactttggaacacattaat
ttagaagtcagcaatgaacgtttaaaaacatcactgatggaaaaagaggaatcgcaacaa
tatcgtaaacgttacgatatgcgtcaacgtttacccgccatgaagcagaggcaagatgtt
ttgaaagccatagaagaaaatcaagtggttcttattgtgggcagtactggatgtggtaag
acaacacaagtgcctcagatattactagatgaatttacaaataatggtcgaggggcagaa
tgtcgtattgtttgtacgcaacctcgaagaatatcggctatatcggtggccgaacgtgtg
gcttatgagagagatgaatcgttgggttcttcggtgggttatcaaatacgtttggaaaac
cgattgccccgagattatggttcaattttatattgcaccactggtatattattacaaaaa
atgcaatctaatcctttattaattggtataaatatcataatattggatgaaattcatgaa
cgtagtgtggaatctgatcttttaatggctctacttaaaaagatattacctcatcgtgcc
gatcttaaagtgatattaatgagtgccaccgtttcggaggaaacattttgtgaatatttc
aataattgttttacactctacattgagggcactctatttcccgttgaagttctttatctg
gaggatgttttgcaagaaaccggttttactggatttgaaaacctcgcacttgctcaaaat
tctcatggtcgtggtaggagacgtgatggtggagaagctggacgcaataatcaatacaat
caaatgatctctacgtacttaccggcattacaaggcaaatataatcgtcaagtagtcgat
actataagaaaatataaagatacagagggttgtgaaaatttactctttttggagcattta
atattttatatatgtgaaaataaaccacccggagctattttagtatttttaccgggtttc
gaaagaatttctaaattgacaacgcaattgcaaaaaccttctacgcccaagcacagagaa
ttggctcaaaagatacaagtttatccgctgcattcaatgatgcctacagtcaatcagaag
agtatcttcaagcccgccccagatggtatgcgtaaagttatattatcgactattttggca
gagacttcggtcaccatagacgatgtggtttatgttataaatacgggtaaaactaaaaat
aaagattatgatatttcacaaaatatacaaaccttagaggaacaatgggttagtaaagcc
aatacgcaacagcgtaaaggacgtgccggacgtgtgcaaccgggtatttgttataattta
tttaccagaattagagaacgtcttatgttggaagtgcctataccggaaatattgcgcagt
aaattggaatctattattttaaatcttaaacttttacacatatcgaatccttatgaattc
ctaaaaactctgattagtgtaccaaatgaacaagctattagtcatggtttaaatttatta
aaacgcattgaggccttagatgttaatgataacttaacaccattgggtttgcatttagca
catttacccatagatccgcaaatgggtaaaatgattttaatgtctgctcttttccgctgt
ctggatcccataacctctgctgctgctggtttatcttataaaagtcccttttacacaccg
atgggtttggaaaaaaaggtggatgctattaagcgtgaattgtctaataattgtaaaagt
gatcatttattaatacacaacgttatcgagggctatcgtgaggccaaagataataattgt
catatgaactattgttatgagaattttcttagtcacacgacacttacacaaattgaaaat
atgaaacgacaatttgctgatttattgaaaaattcaagttttttggaatcatcaaattgt
tgtgataaaagttcgaatgttaattcgtcgaatgtgcctctgttgagggcgattattgct
gctggcctttatccaaatatagcatttttaagacaagtgaaacaagtaggcaatagatgt
catgcgctgcataaaatgtcaacgccggaagataatcgtgtaaattttcatccttcctct
attaattgtggtcagacatcatttgattcaaattattttgtttatttgcaaaaacaaaga
tcaaaagaagtgtatttattggatgccaccatggttttccccatggccttgttaatattt
ggtgatggtgttaaaaagggcataactgctgaaaaacaaccttacataagtgtggctaat
aaatacttttttaaatgtaatgagaactcttcattgtttatactgagattgcgtgaaaaa
cttggaattctgctgcaaaagaaggccttgtacccgtcgcccatcgaaatcaatagcaag
gatgaaaagcttataaaggctatacaaattttgctctctttggatgatgccggcgatctt
gctgatcagtttctatcgactgatgatgaagatgatggatctataccttcacaaagattt
aaatccactatctaa
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