Lucilia sericata (common green bottle fly): 119604502
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Entry
119604502 CDS
T08270
Name
(RefSeq) exosome complex component RRP45 isoform X1
KO
K03678
exosome complex component RRP45
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119604502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsq03019
]
119604502
Messenger RNA biogenesis [BR:
lsq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119604502
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
119604502
NCBI-ProteinID:
XP_037813084
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MKETPLSTCERNFIIQAIKQNQRLDGRKNDEFRPIKINYGADWGSVLVALGETKVIAQVS
SELGVPKAVRPNEGMLHINVELGPMAAPHFEAGRNSELTVQLNRTLERTFKESRCLDLES
LCIQSEERVWILRVDLNVLNHEGNLFDCCSVATLCALMHFRRPEVSLVEDDVVIHTEAEK
EPLPMVMHHYPVCVSYCTFDDGRIAVADPTIMEERTSESQMIFGINSFRELCCLNLGGSS
LTSSTLLLQSSKRASNQAKKVVDLVKQTLENDLAARENRSNVGFTECLRQNTITSLAEDR
LVLKLRHFTFNDVEETDEQRRKNEFFKNLADKADDDDDDDSEGEITLESMNAAKTTSGDV
KKSTNDTKWMPEEVNDANMESATSSEEEEVLERSTKVIEQPKASKNKSASKNKPKAKKAT
AQRNTADSTSDSEEEEQVVL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacacctttatcaacatgcgaaagaaactttataatacaagctattaaacaa
aatcagcgtttggatggccgcaaaaatgatgaatttcgtcccataaaaataaattacggg
gccgattggggtagtgttttggtggctctgggagaaaccaaagttatagctcaagtttcc
agtgaattgggtgtaccgaaggctgttagacccaatgagggtatgctgcatataaacgtt
gagttgggacccatggctgctccacatttcgaagctggtcgtaattctgaacttaccgta
caattgaataggaccttggaaaggacatttaaagaatccagatgcttagacttggagtca
ttgtgtatacagtccgaagaacgtgtatggattttgcgagtcgatttaaatgtgctcaac
catgagggtaatcttttcgactgttgttccgtagccacattgtgtgctttaatgcatttt
agaagacccgaagttagtttagttgaagatgatgtagttatacatacagaggctgaaaaa
gagcctctgcctatggtcatgcaccattatccggtttgtgttagttattgcaccttcgat
gacggtcgcatagcggtagcagatcccaccataatggaggaaagaactagtgaatcacaa
atgatatttggcataaattcatttagagaattgtgctgccttaatttgggcggctcttcc
ttaacaagttccaccttattattacaatcatctaagagagcatctaatcaggcaaagaaa
gtggtagacttagttaagcaaactttagaaaatgatttggcggcgagagaaaatcgttcc
aatgttggttttaccgaatgtttgagacagaatactatcactagtctagcagaagatcgc
ttagtcttaaaactaagacactttacctttaatgatgtcgaggaaacagacgaacaaaga
cgtaaaaatgaattctttaaaaacttggcggataaagcagatgatgatgatgatgatgac
agcgagggtgaaattacactggaaagtatgaatgctgcaaaaactacctctggtgatgtg
aaaaaatctacaaatgatactaaatggatgcctgaggaagttaacgacgctaatatggaa
tctgctactagtagcgaggaagaagaagttttggagagatctactaaggttatagaacag
cctaaagctagcaagaataaatctgctagtaaaaataaacctaaagcgaaaaaggcaaca
gctcagagaaatactgcagactcaacatcagattctgaagaggaggaacaagttgtttta
tag
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