Lucilia sericata (common green bottle fly): 119605394
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Entry
119605394 CDS
T08270
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119605394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsq03019
]
119605394
Messenger RNA biogenesis [BR:
lsq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
119605394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
NRDE-2
Elongin_A
Motif
Other DBs
NCBI-GeneID:
119605394
NCBI-ProteinID:
XP_037814398
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MSVRDQIKIDIEWGHERLVRAQQVVEMRPYDIESWSTLLREAQTRPVNEVRTLYESLVNV
FPTTARYWKIYIEQEMKGRNFEKVEKLFQRSLVKILNIDLWKLYLTYVKETKAGLSTHKE
KLAQAYDFALEKIGMDLHSFSIWQDYISFLRSVEAVGSYAENQKITAVRRVYQKAVITPI
VGIEILWKDYIAFEHNINPIISEKMSLERSKDYMNARRVAKELENITKGLNRNLPAIPPT
LAKEEVKQVELWKKFIAFEKSNPLRTEDTALITRRVMFATEQCLLVLTHHPAVWHQAAQF
LDQSSKALADKGDTQAAKIFGDECANILERSINGVLNKNSLLYFAYADFEEGRMKYDKVH
AMYNKFLSIPDIDPTLAYVQYMKFARRAEGIKSARAIFKKAREDIRSRYHVFVAAALMEY
YCSKDKDIAFRIFELGLKRFGGSPEYVMCYIDYLSHLNEDNNTRVLFERVLSSGGLTPQL
SVNVWNRFLEFESNIGDLSSIVKVERRRSAVLENLKEYEGKETAQLVDRYKFLDLYPCTT
VELRSIGYTENVGITTNKLAAGPGNAAAAAIKEEPESEPAVQLPKPDFGQYIPFKPKANA
YPGAHPLAGGTFPQPPALAALCASLPPPLCFRGPFVSIEMLFDIFNRIKLTDAAPLPSGD
PGCDIKIFDLAKSVHWIVDESSLTGDTSGGSGVKRRRMLPGGDDSDEETPAPAPPANDIY
RLRQQKRFSK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaagagatcaaataaaaattgatattgaatggggccacgagcgcttagtgcgc
gcccaacaagtggtggaaatgcgcccttatgatatagagtcttggtccaccttgctgcgt
gaggctcagacgcgaccggtcaatgaggtgcgcactttatatgaatctttggttaatgta
tttcccaccaccgcacgttattggaagatttacatagaacaggaaatgaaaggacgcaat
tttgaaaaagtggaaaagttgtttcagcgctccttggtgaagattttaaatatagattta
tggaaattatacttgacctatgttaaggaaactaaggcgggtttgagtacgcacaaagaa
aaactggcccaggcttatgattttgctttggaaaagataggcatggatttacattcattc
tctatatggcaggattatatttctttcttgcgcagtgtggaggcagtgggcagttatgca
gaaaatcaaaaaatcactgctgtacgcagagtctatcaaaaggcggtcattacacccatt
gtaggcatagaaatattatggaaagattatatagcctttgagcataacattaatcccatt
atatccgagaagatgagcttggaaagatctaaagattacatgaatgcgcgaagagtggcc
aaggaattggagaatattaccaagggcttgaaccgcaatttacccgctataccacccacc
ctagccaaagaggaagttaaacaggttgaactatggaaaaaattcattgcttttgaaaaa
tccaatcctttgagaactgaagatactgccctcattacccgacgtgttatgtttgccact
gagcaatgtttgctagtgctaactcaccatccggctgtttggcatcaagcagcacaattt
ttagatcaaagttctaaagctttggcagataaaggcgatacccaagcggccaaaatcttt
ggcgatgaatgtgccaatatcttggaacgttccattaatggtgttttaaataagaattct
ttgttgtattttgcttatgctgattttgaggaaggacgcatgaaatatgataaagtacat
gctatgtataataagtttttatccataccggatatagatccaacattggcctatgtccag
tatatgaaatttgctcgccgtgctgaaggcatcaagtctgcccgtgctattttcaaaaag
gcccgtgaagacatacgttctcgttatcatgtctttgtggcggctgccctcatggaatac
tactgttcgaaagataaagatattgcctttcgtatattcgaattgggtttaaaacgtttt
ggtggcagcccggaatatgtcatgtgttatatagactatttatcgcatctgaatgaagat
aacaacaccagggtgttgtttgaacgggtgttatcatcgggtggtctaacgccacaattg
agtgttaatgtttggaatagatttttggaatttgaatcgaatattggtgacctatcgagt
attgtaaaggtggagagacggagaagtgctgtgttggaaaatcttaaagaatatgagggt
aaggaaactgcccaattggtggatcgttataagtttttggatttatatccctgtacaaca
gtggaattaagatctataggttatacagagaatgtgggtattaccaccaataaactggct
gcgggtcctggtaacgcagcagcggctgccatcaaggaagaaccagagtctgaaccagct
gtgcaactgccaaagccagattttggtcaatacatacccttcaagcccaaggcaaatgca
tatcccggcgcacatcccctagcgggtggcacttttcctcaaccacccgccttggcggct
ttgtgtgcttctttgccacctcccttatgctttagagggccatttgtttccattgaaatg
ttgtttgacatatttaatcgtataaaattaacagatgctgctcccttaccctccggtgat
cctggttgcgatatcaaaatctttgatttagccaaatctgttcactggattgttgacgaa
agctctttgacgggtgacacttcaggcggatcgggtgtaaaacgtcgacgcatgctgccc
ggcggtgatgacagtgatgaagaaacacccgctcctgcaccaccagcaaatgatatctat
cgtctgaggcaacagaaacgcttttccaaatga
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