Lucilia sericata (common green bottle fly): 119605462
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Entry
119605462 CDS
T08270
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03020
RNA polymerase
lsq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119605462
09124 Replication and repair
03420 Nucleotide excision repair
119605462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsq03021
]
119605462
03400 DNA repair and recombination proteins [BR:
lsq03400
]
119605462
Enzymes [BR:
lsq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119605462
Transcription machinery [BR:
lsq03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119605462
DNA repair and recombination proteins [BR:
lsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119605462
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
119605462
NCBI-ProteinID:
XP_037814505
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MMYDNEEEMYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPAIDLQAEAQHTSGEIETPPRFLLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKTKIVEGQAPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKSEIRSCLEHSSRPTSTLWVNM
MARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGTRGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT
QKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKTHVEMLKERDYNNYSWQVLVAS
GVVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGYFRSVFYRSYKDSENKRIGDQEENFEKPNRQTCQ
GMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDGNTKRFTKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMAFTC
EGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY
GYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECK
GCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVV
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgacaatgaagaagaaatgtacgaggaggagaatgccgaggaaatctcccat
gaattgtggcaagaagcctgctggattgttatcaacgcctacttcgatgagaagggtttg
gtacgtcagcagttggacagttttgatgaatttattcagatgtctgtgcaacgtatagtg
gaagattctccggctatagacttgcaagccgaagcccagcacacttcaggagaaattgag
actccccctcgttttcttttaaaatttgaacaaatttatttatccaaacctacacattgg
gaaaaagatggttcgcctagtcccatgatgcccaacgaggctcgtttgcgtaatttaacc
tattcggctccactttatgtggatataacaaaaactaaaattgtagaaggtcaagcaccg
gtagagacacaacatcaaaagactttcattggcaaaattcccattatgttacgttccacc
tattgtttgctatcccaactaacagatcgtgatttaacagaattgaatgaatgtcctttg
gatccaggtggttattttattattaacggttccgaaaaggtacttattgcccaggagaaa
atggccaccaatactgtgtatgtattcagcatgaaagatggcaaatatgcctacaaatct
gaaattagatcttgcttggagcatagttctcgtcccacttccaccctttgggtcaatatg
atggccagaggttcacagaatattaaaaagtccgccattggtcaacgtattatagccatt
ttgccctatatcaaacaggaaattccaattatgattgttttccgtgctttgggttttgtg
gctgatcgtgatattttggaacacattatttatgatttcgatgatcccgaaatgatggaa
atggttaagccttccttggatgaggcttttgtagtacaagaacaaaatgttgctttgaat
ttcataggtactcgtggtgccagacctggtgtcaccaaagacaaacgtattaaatatgct
aaggaaatcttacagaaagaaatgttgccccatgtgggtgtttccgatttttgtgaaact
aaaaaggcctattttttgggctatatggtgcacagattgttgctggcttcattgggtcgt
cgtgaattggacgatcgggatcactacggtaataaacgtttagatttggctggtccttta
ttggcctttttatttagaggtctttttaaaaatctaatgaaagaagtcagaatgtataca
caaaagttcattgatcgtggaaaggatttcaatttggaattggccatcaaaacaaatatt
attactgatggtttacgttattccttggctactggtaattggggtgatcagaaaaaggct
catcaggccagagctggtgtatctcaggtattgaatcgtctaacttttgcctccacctta
tcccatttgagacgtgtcaactcgcccattggtcgtgatggtaaattagccaaaccccgt
cagttgcacaatacactgtggggtatgttatgcccagccgaaacacccgaaggagctgct
gtaggtctggtaaagaatttagccttaatggcttacatttctgtcggttcccaaccttca
cccattttggagttcttggaagaatggtctatggaaaatttagaagaaattgctccatct
gctatagcggatgccaccaagattttcgttaacggttgttgggtaggcatacatcgtgat
cccgaacaattgatggccacattacgtaaactgagaagacaaatggatatcattgtatcc
gaagtatctatgattcgtgatattcgcgatcgtgaaattcgtatttatacagatgctggt
agaatttgtcgccctctgttgattgttgaaaatggttcattgctattgaagaagactcat
gttgaaatgttaaaggaacgtgattacaataactacagttggcaggttctggtagcctca
ggtgtagtggaatatattgacaccttggaagaggagactgttatgattgctatgtcaccg
tacgatttgaaacaagataaagattatgcctattgtaccacttacacacattgtgaaatt
catccggccatgatattgggtgtgtgcgcctctattattcccttccctgatcacaatcag
tctcctcgtaacacctatcaaagtgctatgggtaaacaagctatgggtgtgtatattacc
aatttccacgtacggatggacactctagcccacgttttatactaccccatgaaaccttta
gttaccacacgttctatggagtatttacgtttcagagaattgcctgcgggtatcaattcc
attgtagccattctttgttataccggttacaaccaagaagattctgtcatcttaaatgct
tctgctgtagaaagaggttacttcagatccgtgttttaccgttcatacaaagattcggaa
aacaaacgtatcggggatcaagaggagaactttgaaaagcccaatagacaaacctgccaa
ggcatgcgtaatgctcattatgacaaattagatgatgatggtattattgctcctggtatt
cgtgtgtccggtgatgatgtggttataggtaaaactattactctgcccgaaaatgatgat
gaattagatggcaatacaaaacgttttacaaagagagatgcctcaacgttcttgcgtaat
tctgaaactggtattgtcgatcaagtaatgttgacacttaacagtgagggctacaagttt
tgtaagattcgtgtgagatcagtgcgtataccgcaaattggtgacaagtttgcttcgcgt
cacggtcaaaagggtacttgtggtattcagtatcgtcaagaggatatggcatttacttgt
gaaggtttagctcccgatattattattaatcctcacgctattccctctcgtatgacaatt
ggccatttaattgaatgtctacaaggtaaacttggttcaaacaaaggtgaaattggtgat
gccacaccattcaatgatgccgtcaacgtacaaaagatttcgactttcctgcaagaatac
ggctatcacttgcgtggtaatgaagtcatgtacaacggccacaccggtcgcaaaattaat
gcccaagttttcttgggtcccacctactatcaacgtctcaaacatatggtggatgacaaa
atccacagcagagctcgtggtcctgtacagattttggtgcgtcaacctatggaaggcaga
gctcgtgatggtggtctacgtttcggtgagatggaacgtgattgtcagatatcccatggt
gctgcacaatttttacgtgaacgtctctttgaagtctccgatccgtatcgtatacatgtc
tgtaatttctgtggtctaattgcaattgccaatctgcgcaacaacacgtttgaatgtaag
ggctgtaagaataagacacaaatctcacaagttcgtctaccgtatgcagctaaattattg
ttccaagaattaatgtctatgaatattgcaccacgtttgatggtcgtttag
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integrated database retrieval system
