Lucilia sericata (common green bottle fly): 119606555
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Entry
119606555 CDS
T08270
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03008
Ribosome biogenesis in eukaryotes
lsq03013
Nucleocytoplasmic transport
lsq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119606555
03015 mRNA surveillance pathway
119606555
03008 Ribosome biogenesis in eukaryotes
119606555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsq03019
]
119606555
03009 Ribosome biogenesis [BR:
lsq03009
]
119606555
Messenger RNA biogenesis [BR:
lsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119606555
mRNA cycle factors
Stress granule specific factors
119606555
Ribosome biogenesis [BR:
lsq03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
119606555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
RRM_NXF1-2
LRR_NXF2
LRR_4
LRR_9
LRR_8
Motif
Other DBs
NCBI-GeneID:
119606555
NCBI-ProteinID:
XP_037816033
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MPKPRGGQRQQYNSGGSSGSRFQALNDYQNDHDDRDNDGRKKERNNTRRVSFKPSALQKQ
GGIKSRLAEMAVRNRLEDDEDMDGLTPNTLYEDRRSSRRKGSPIPKGKFGQSRKLAPSQF
GWYQVSIQSGQRYSKDDVIRAILSAISPDIFIPHYWRTEKNCVVFFVDDYAIAQRLQQIE
RSVQMTDGYRLFIRVRASCPIVSVDEEFKEKMKLVMAKRYNAHTKALDLTKFHADPDFRN
MFVGLFRTPVMSAALDIIQKNIPDLEALNLNENNIASMESFKNVEQRLPHLKILYLANNN
LPSLAHLLVLRNVPIVDLVLKNNPLRQRYKDHALYVSEVRRKFPKIVKLDGEDLEPQILF
DVNDTSTLPKSQASFLCDASGADIIRQFLEQYFMIFDSENRQPLLDAYHEQAMMSISVPP
ASQAGRLHSFWKFNRNFRRIVNNEDVTKIRQLKVGRLAVVSTLAEWPKTQHDPQSFSVDL
TLFTPHLLAFTVAGLFKELDSSSNSGGDIRYFQRQFVIVPAGGGFCIRNEMILVTSATGA
QARTFLKPPAAVSTTPTAAGTAGAAATVTSAAAGSLQNRLQMNQPTTSAAALMPPPADVA
PRQPDESMKMQMVQAMCVQSNMNAEWSRKCLEETNWDYNHAAFVFEKLHKECKIPPEAFI
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacccagaggaggacaacgtcaacaatataatagtggtggcagcagtggttca
cgttttcaagccctcaatgactatcaaaatgatcatgatgatagagacaatgatggtcgt
aaaaaggaacgtaataacaccagaagagttagttttaagccttcggccttgcaaaaacag
ggcggcatcaaatctcgcctggcggagatggccgtacgcaatcgtttggaagatgatgaa
gatatggatggtttgacaccaaatactttgtatgaagaccgtcgtagctcccgtcgtaag
ggatcacccatacccaaaggcaaatttggccaatcccgtaaattagcacctagtcaattt
ggatggtatcaagtgtcgatacaatctggtcaacgttattctaaagatgatgttatacgc
gctatactcagcgccatatcaccggatatttttataccccattactggcgtactgaaaag
aattgtgtggttttctttgtggatgattatgccatagcccaacgtttacaacaaatcgaa
cgtagcgtccaaatgaccgatggctatcgtttgtttatcagagtacgggccagttgcccc
attgtttcggtcgatgaggaatttaaggaaaaaatgaaattagttatggctaaaagatat
aatgcccatactaaggctttagatttgaccaaattccatgctgatcctgattttcgtaat
atgtttgtgggtcttttccgtacccctgttatgtcggccgctttagatataatacaaaag
aatatacccgatttggaggctttaaatttgaatgagaataacatagcctccatggaaagt
tttaagaatgttgaacaaagattgccgcatttgaaaattctatatttggctaataataat
ttaccttctttggcccatttactggttctacgcaatgtccctattgtggatttggtcttg
aagaataatcctttacgtcagcgctataaagatcatgctctttatgtcagtgaagtacga
cgtaaatttcccaaaattgttaaactggatggcgaagatctggaaccacaaatcttattc
gatgtcaatgacacttctaccctgcccaagtcacaagcttcatttttatgtgatgcctcg
ggtgctgatataataagacaatttttggaacaatatttcatgatattcgatagtgaaaat
cgtcagcctttgttggatgcttatcatgaacaggctatgatgtcgatatctgtgccaccg
gccagtcaagctggaagattacattcattttggaaatttaatcgtaatttccgtcgtatt
gtcaataatgaggatgtaaccaaaataagacaattgaaggtgggtcgtttggctgtggtc
tccactttggcagagtggcctaagacacaacatgatcctcaatcgttttcagtggatttg
actttgtttacgccccacttactagcctttaccgtagctggtttattcaaagaattagac
tcttccagcaattctggcggtgacatacgctattttcaacgacaatttgttatagtaccc
gctggcggtggcttttgtatacgcaatgaaatgattttagtaacaagtgctactggagcg
caggcacgcacattccttaaacctccagcagccgtaagtacaacaccaacagcagccggt
actgctggcgccgcagccacagtaacaagtgctgctgctggtagtttacaaaatcgttta
caaatgaatcaacccacgacttccgctgccgctctaatgccaccaccagctgatgttgct
cccagacaaccggacgaatctatgaaaatgcaaatggtccaggccatgtgtgttcaaagt
aatatgaatgccgaatggagcagaaaatgtttggaggaaactaattgggattataatcat
gcagcttttgtttttgaaaaattacacaaggaatgtaaaataccccctgaggcttttatt
aaataa
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