Lucilia sericata (common green bottle fly): 119606948
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Entry
119606948 CDS
T08270
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03440
Homologous recombination
lsq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119606948
03450 Non-homologous end-joining
119606948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsq03032
]
119606948
03400 DNA repair and recombination proteins [BR:
lsq03400
]
119606948
DNA replication proteins [BR:
lsq03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
119606948
DNA repair and recombination proteins [BR:
lsq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
119606948
BRCA1-C complex
119606948
NHEJ (non-homologous end-joining)
MRX complex
119606948
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
Rad50_zn_hook
SbcC_Walker_B
SMC_N
AAA_29
AAA_16
AAA_21
ABC_tran
YdjO
AAA_22
Motif
Other DBs
NCBI-GeneID:
119606948
NCBI-ProteinID:
XP_037816551
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MSTIEKLTIQGIRSFGGNAGDAQLIRFSSPVTLILGENGCGKTTIIECLKYALTGECPPG
SDRGKNFVHDPKIFSLTDVLGQIKLEVRNVQGARLSICRSMKLGMKRNKITFETLDATIN
YLNDDDKKGSESISKRCADVDLVMSQFMGVSKAIINNVLFCHQEDSSWPLDEAKKLKEKF
DAIFGITEYNKALDRIIKMRKEEMEQLKIKEADLRFVEHLKQEMEGKSLGLQKYKQKAQT
IDDQCKLCDDEMAPIEERLKQIHKIEYEVGKYQAQKVELQTKQKNCTDQMNGLKKKIKKM
FEGTMEELDNEISSFQQRIAEKRMERKEVEEKLKSQRVEEKSLQHKHNEIDKKRVVIQQQ
KQKEQDCKQKRADKLKALCQELNIPIEFDLMNSVNEITELLEEIQAFLAAEHCKISETVT
QHDKEDQERQTKIDQLRVELTKLQESVSTMQKQKKAYEKESEQLERNILQTEKATQQLKV
VTEKLKETEQCYEESLAKFNQNEFRESLKNDKETIKTLEAQFRKVDERLTFLNSISKLVA
ELSIKEKELEKREEEMRKVKSKHSDNFRKVFEEGRTIETNFQRHLKASYEKSRIKIKEYN
EKLNSMKLKHQRIEIKRKNLKDDLQKCEKELEDCKEKIFEKCHSTPYEEMLAKSKASVSK
YQLEHGAQKSAEVFYKNYLQKIDEEPYCPLCQKCMDTEEASNLTTELTDKIQDLPQNIER
VEKLLKEEQKKYESLLHLKPIIDKVARFEAEIPQKREVLKSLQNQLAESSTEMENMQTLL
AEPTTTMETANSMMGDMSLLDECIKESNRLKNDIEKLKRKMPQDTESDNISIDEVQAEKT
TISAELEEKRKELDKNQQYYEKNMDALNKLRELKNSLKDQQIKLQEGIQNLPQLKERKAE
LSNLLVDMLAEMQEKQAKVSPLKQQLSAASSEKSQLKEKNRVKINQMQKKLDTFRRMDHD
INRLDNEVLDYQQLNLDQQLKDKEDALNASKEEIKKIAQTIAETNEQLDAIKAEIANQES
IDRDFKDNRELKILEEKLKDLNVKFEALMEELGKLDFSNVSKEKSELTKKRDKITVRKGE
LLGQRGEVKHQITKLERELAEPKYRDSLVNYRRIYYEVQLTKKVANDLGQHRVALEWALM
QFHTEKMQEINRLIREYWRLIYRGNDIDYIQIQTEEGKESASPMDRRRSYNYRVIQSKNN
SEIEMRGRCSAGQRVLASLIIRMALAETFSSNCGVLALDEPTTNLDRNNILSLCDALNRI
VEDRQTQSNFMLIIITHDEAFISTLGKINSYHRVFRNDECKSVIRQVQVA
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccatcgagaaacttacgatacaaggtatacgcagttttggtggtaacgctggt
gatgcacagcttatacgttttagttcgccggtaactttgatattgggtgagaatggttgt
ggcaagaccaccatcattgaatgtcttaagtacgccttaacaggtgaatgtccgcctggc
agtgaccgcggcaagaattttgtgcatgaccccaagatttttagtctcaccgatgtcttg
ggccaaattaaactagaggtgcgtaatgtgcagggagcccgcctttccatctgtcgttcc
atgaagctgggtatgaagcgtaataaaattacatttgaaactttggatgccactatcaac
tatttgaatgatgacgacaagaagggcagtgaatcgataagtaaacgttgtgccgacgta
gacttggtcatgagtcagtttatgggcgtctccaaggccattataaataatgtactcttt
tgccatcaggaagattccagctggcctctggatgaggcgaagaaactcaaagagaagttt
gatgccatttttggcattaccgagtacaataaggcattggatcgtattatcaaaatgcgc
aaagaggaaatggaacaattgaaaattaaggaagccgatctacgttttgtggagcatttg
aagcaagaaatggagggaaaatctttgggtcttcaaaaatataaacaaaaagcccaaaca
attgatgatcaatgtaaattatgcgacgatgaaatggctccgattgaggaacgtctaaag
cagatacataaaattgaatatgaagtgggaaaatatcaggcgcagaaggtggaattgcaa
actaaacaaaaaaattgcaccgatcaaatgaacggactcaaaaagaaaattaagaaaatg
ttcgaaggtaccatggaagaattagataatgaaatatcatcgttccaacagagaattgcc
gaaaaacgtatggaacgtaaagaagttgaggaaaaacttaaaagtcagagagtggaggag
aaaagtctacagcataaacataatgaaattgataagaaacgtgttgtcatacagcagcaa
aagcaaaaagaacaagattgcaaacaaaaaagagccgataaattgaaagcactttgccag
gaactcaatatacccattgaatttgatttaatgaattcggtaaatgaaatcaccgagcta
ttagaggaaatacaagctttcctagcggccgaacattgtaaaataagtgaaactgttaca
caacacgataaggaagatcaagagcgtcaaactaaaattgatcaacttcgtgttgagttg
actaagttgcaagaatccgtctccactatgcaaaagcagaaaaaagcttacgaaaaagag
tccgagcaacttgaaaggaatattttacaaacggaaaaggctacccaacaacttaaagtg
gtaaccgaaaagctcaaggagaccgagcaatgttacgaagaatcgctggcaaaattcaat
caaaatgaatttcgtgaatctttgaagaatgacaaggaaactattaaaacattagaagca
caatttcgtaaagtagatgaacgtttaacatttcttaattccatatcgaaactggtggcc
gaattgagtattaaagagaaggaactagagaaacgcgaagaggaaatgcgcaaagtgaag
agtaaacacagtgacaacttccgcaaagttttcgaggagggacgtactatagaaactaat
ttccagcgtcacttaaaagcttcctatgaaaaatctcgtattaaaattaaggaatacaat
gaaaaattaaattccatgaaattaaaacatcaaagaattgagattaaacgcaaaaatctt
aaagatgatttacaaaaatgtgaaaaagaattggaagattgtaaagagaaaatatttgaa
aagtgtcattcgactccctatgaggaaatgttggccaaatccaaggcctctgtgagtaaa
taccaattggaacatggcgctcaaaaatcagctgaagtattttataagaattatttgcaa
aagatagatgaagaaccctactgtcctttgtgccagaagtgtatggatacagaagaggcc
tccaatctaaccacggaattaactgataaaatccaagatttaccccaaaatattgaaagg
gtggagaaactgctcaaagaagagcaaaagaaatatgaaagtttattacatttaaagcca
attattgataaagtggcccgttttgaagcagaaattccccaaaaaagggaagtattaaaa
agtttgcaaaatcaattggccgaatccagcactgaaatggaaaatatgcaaactcttctg
gccgaacccactacaactatggaaaccgccaactccatgatgggagacatgtcacttttg
gatgagtgcattaaagaatcgaatcgccttaaaaacgatattgaaaagttgaaaagaaaa
atgcctcaagatactgagagtgacaatatttccatagatgaagtacaggcggaaaaaaca
acaatttcggcggaattagaagagaaacggaaagagttggataagaatcagcaatattat
gaaaagaatatggatgctcttaataaactgagagaattgaaaaattctttgaaagatcag
caaataaaactccaggaaggcatacaaaatttaccgcaacttaaggaacgtaaagctgaa
ctttcgaaccttttagttgacatgttggccgaaatgcaagagaagcaagctaaagtgtcg
ccgcttaagcaacaattaagtgccgcctcttcggaaaaatctcagctaaaagaaaagaat
cgcgttaagataaatcaaatgcaaaagaaactggatacttttagaagaatggatcatgac
attaataggctggacaatgaggttttggattatcaacaattaaacctggatcaacaatta
aaagacaaagaggacgctttgaatgccagcaaagaagaaattaagaaaatagctcaaact
attgccgagactaatgagcaattggatgccatcaaagcggagattgccaatcaagaatct
atagatcgtgactttaaggacaatcgtgaattgaagatattggaagaaaaacttaaagat
ttaaatgttaaattcgaggcccttatggaggaattgggcaaattagatttctcaaatgtc
tccaaagagaaatcggaattaacgaaaaaacgtgacaagataaccgtgcgcaaaggtgaa
cttttgggtcagcgtggcgaggtcaaacatcaaataacaaaattagaacgggaactggca
gaaccgaaatatcgggattctcttgttaattatcggcgcatttactatgaagtccaattg
accaagaaggtagccaatgatttgggccaacatcgtgtggccttggagtgggcccttatg
caattccataccgaaaaaatgcaagaaattaatcgtttgatacgtgaatattggcgtctt
atttatcgtggcaatgacattgattacatacaaatacaaacggaagagggtaaggagtcg
gcctcacccatggatcgtcgccgcagttataattatcgtgttatacaatcgaaaaataat
tccgaaattgaaatgcgtggtcgctgcagtgcaggtcaaagggtactcgcctccctcatc
atacgtatggctttggccgaaacatttagcagtaattgtggtgttttggccttagacgaa
cccaccaccaatttggatcgcaataatattttatcgttatgtgatgccctcaatcgtatt
gtcgaagatcgccagactcaatccaactttatgttgatcataatcactcacgatgaagcc
ttcatttccaccttgggcaaaatcaatagctatcaccgtgttttccgtaatgatgagtgt
aaatctgtaatacgtcaagttcaagtagcctag
DBGET
integrated database retrieval system
