Lucilia sericata (common green bottle fly): 119607276
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Entry
119607276 CDS
T08270
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119607276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsq03041
]
119607276
Spliceosome [BR:
lsq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119607276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_SPT8
WD40_like
Nha1_C
Motif
Other DBs
NCBI-GeneID:
119607276
NCBI-ProteinID:
XP_037817065
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MSDDDIQYVKRQRTLYYGSLEDAERKRMLAGATSNATTATQASQLEDIDSDEDYEEQKKH
GTTIAPPPTAAALANKIDDDYFDLETEISKDKVALLEEFERKKRARQINVSTDDAEIKRN
LRQLNEPICYFGEGPAERRRRLRELLASLGENAIKQKLAEEEERKQLQKEQETTWYHEGP
ETLRIARLWIADYSLPRARERLEKAKEALEVPSATRAGRMVELQKRLQSLAPHSSQVGDT
RPLGGCAFNHDSSLLMTSSWSGLCKVWRVPDCNLEQTLRGHTSYVGGVAFRPGVSFEEKN
VVAMASGGHDGAVKLWGFDSEESIADITGHMPHRVSKLNFHPSGRFLATACYDASWRLWD
LEQKTEVLHQEGHAKAVHCLSFQSEGSVIVTGGLDAFGRVWDLRTGRCIMFLEGHLGSIF
GADFSPNGYHIATGSQDNTCKIWDLRRRQSVYTIPAHVNLISDVKYQRDGGSFLVTCSYD
CTTKIWSNKTWQPLKTLQGHDGKVVSLDISPDSQFIATTSFDRTFKLWSPES
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgacgatatacaatacgttaagcggcaaagaacactttattatggttcattg
gaggacgctgagcgcaaacgtatgttggctggagcgacatcgaatgctacgacagcaaca
caagcttcccaactggaagatatagattcggatgaagactatgaagagcagaaaaagcat
ggaacaactatagcgcctccacccactgccgccgccctagcaaataagatcgacgatgac
tattttgatttggaaacggaaatatcgaaggataaagtagccttactggaggaatttgag
cgcaaaaagagagcacgacaaataaatgtatctaccgatgatgcggagatcaaacgaaat
ttacgtcagttaaatgagcccatttgctatttcggcgaagggccggccgagcgcagaagg
cgtctcagggagttgttggccagtttgggagaaaacgctataaaacaaaagttagccgaa
gaagaagaacgaaagcaattgcaaaaagaacaggaaactacttggtaccacgagggtcca
gaaactcttaggatagctaggctatggattgccgattattcattgcctagagcgagagaa
cgtttagagaaagctaaagaggctctagaagtgccaagtgctaccagagccggtcgtatg
gtggaattacaaaaacgtcttcaatctttagctccacattccagtcaggtgggtgatacc
cgtccattgggcggttgtgctttcaatcatgattcgtctctcttgatgacatcatcctgg
tcgggtttatgcaaagtttggcgggtacccgattgtaacctagaacaaactctacgcggt
catacaagttatgtgggaggagtggcttttcgtcccggcgtttcatttgaagagaaaaat
gtggtagctatggcatccggaggtcatgatggtgctgtaaaattatgggggttcgattct
gaagaatcaattgctgacataacgggacatatgcctcatcgcgtatcgaaattgaatttt
catccatctggtcgttttctagccactgcctgttatgacgcatcatggcgcttgtgggat
ttggagcaaaagactgaagtacttcatcaagagggccatgcaaaggctgtgcattgttta
agctttcaatcggaaggcagtgttatagttacgggcggtctagatgctttcggcagagtt
tgggatttgcgaacaggtcgttgtataatgtttttggaaggacatttgggttctatattc
ggtgcagacttttcacccaatggctatcatattgctactggttcccaggacaatacttgt
aaaatatgggatctaagacgtcgtcaatctgtgtacacaataccggctcatgtcaatctt
atttccgatgtcaagtatcaacgtgatggcggtagttttcttgttacgtgttcttacgat
tgcactactaagatatggtctaataaaacgtggcaaccactcaaaacactacagggtcac
gatggcaaagtggtttcattagatatatcaccagactcacagttcatagctacaacatca
tttgatcgcacatttaaattatggtcccccgaaagttaa
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