Lucilia sericata (common green bottle fly): 119607721
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Entry
119607721 CDS
T08270
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119607721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsq03041
]
119607721
03009 Ribosome biogenesis [BR:
lsq03009
]
119607721
Enzymes [BR:
lsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119607721
Spliceosome [BR:
lsq03041
]
Complex A
U2 snRNP components
U2 related factors
119607721
Complex B
119607721
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
119607721
Ribosome biogenesis [BR:
lsq03009
]
Eukaryotic type
90S particles
Helicases
119607721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
Flavi_DEAD
ABC_tran
ResIII
AAA_25
ATPase
AAA_7
AAA_30
TsaE
PhoH
T2SSE
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
119607721
NCBI-ProteinID:
XP_037817728
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MSKRRIEVGETYTNKVKKEETATSSSGAAACLAASGTPGSLVGSLAKPPGTMNPFNLKPY
SARFQQLYKKRITLPVFEYQTDFMRLLNNHQCIVLVGETGSGKTTQIPQWCVEYAVSKGK
KGVSCTQPRRVAAMSVAQRVSEEMDVNLGEEVGYSIRFEDCSSPKTLLKYMTDGMLLREA
MSDPMLEQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLVVMSATLDAGKFQQYFD
NAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEDIEGDILMFLTGQEEIEEA
CKRIKREIDNLGSEIGELKCIPLYSTLPPALQQRIFEPAPPRSANGAIGRKVVVSTNIAE
TSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLY
TEKAYKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNY
LAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNE
AKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLA
RIMDRFNLKRSSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQIVQLHPST
CLDHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLLTLAPQYYDMNNFPQCEAKRQLEMLQQ
RLESKQYQTGF
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagacgcattgaagttggagaaacctacacaaacaaggtgaaaaaagaagaa
acagctacctcttcgtcgggagcagcagcttgtttagcggctagtggcacaccaggcagt
ttagtgggttctctggcgaagccacccggcaccatgaatccctttaatttgaagccctat
tcggcacgttttcaacaattgtacaagaaacgtataacattgccggtattcgaatatcaa
acagatttcatgcgcctgttaaataatcatcagtgtatagtgttggtgggtgagacaggt
tctggtaagactacacaaataccccagtggtgtgtggaatatgctgtgtccaagggtaag
aagggggtatcctgtacccaacctcgtcgtgtggctgctatgtccgtggcccaacgtgtt
tccgaggaaatggatgttaatttgggtgaagaagtaggttactccatacgttttgaggat
tgctcctcacccaagactttgctgaaatacatgacagacggtatgttgttgcgtgaggcc
atgtcggatcccatgttggaacaatatcaggtgatcttattggatgaggctcacgaaagg
actttggctactgatatcttaatgggtgttttaaaggaggttattagacaaagaaatgac
ttaaaactagtggtgatgtctgccactttagatgctggtaaattccagcagtatttcgac
aatgctcccctcatgaatgtacccggtagaacccatccagtagagattttctatacccct
gaaccggaacgtgattatctagaagcggccatacgtactgttatacagatacacatgtgt
gaagatatagagggtgatatcctaatgttcctcactggacaagaggaaatcgaagaggct
tgtaaacgtattaaacgtgaaatagataatttgggttctgagataggggaactcaagtgt
atacctttgtattccaccttgccacctgctttgcagcagcgtattttcgaaccagcacca
ccacgcagtgccaatggtgccataggccgtaaagtggtagtttccacaaatattgctgaa
acttctttgaccattgatggtgtagtctttgtcatagatcccggttttgccaaacaaaag
gtctacaatcctcgtatacgtgtggagagtttattagtttcacctatttcaaaggcttcg
gctcaacagagagctggtcgtgccggtcgtactcgccccggaaaatgtttccgtttgtat
accgaaaaggcctataagaacgaaatgcaagataatacatatcctgagattttgagatct
aatttgggcactgttgttttacaactaaaaaaattaggcattgacgatttggtacatttt
gatttcatggatccacctgcacccgaaactcttatgcgtgccttggaacttttgaactat
ttggctgctctcgacgatgatggtaacctaactgatttgggtgcagtaatgtcagaattt
cccttggatccacaattggccaaaatgttaatagccagttgtcaacataattgttcgaat
gaaattttatcaattactgctatgctgtcggtaccacaatgttttgtaagacccaatgag
gccaaaaaagcagcagatgaggctaaaatgagatttgcccatattgatggtgatcatttg
actttactcaatgtctatcatgcctttaagcagagcagtgaagatcccaattggtgttat
gaaaatttcattaatttccgttctttaaaatcggccgataatgtgcgtcaacaattggca
cgcattatggatcgttttaatttgaaacgcagcagcacagaattcacttccaaggattat
tatgtcaatatacgcaaagccttagtacaaggtttcttcatgcaggtggcacatttagag
cgcactggtcactatcttaccattaaggataatcaaatagtacaactgcatccttccaca
tgtctggatcataaacccgattgggttatctacaatgaatttgtactcactactaaaaat
tatatacgtaccgttacagatgttaagcctgaatggcttttaactttggctcctcaatac
tatgatatgaataatttccctcaatgtgaggccaaacgtcaattggaaatgttgcagcaa
cgactggaatctaaacaatatcaaaccggcttttaa
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