Lucilia sericata (common green bottle fly): 119608314
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Entry
119608314 CDS
T08270
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 24-like
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
lsq
Lucilia sericata (common green bottle fly)
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsq03041
]
119608314
Enzymes [BR:
lsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119608314
Spliceosome [BR:
lsq03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
119608314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
AAA_22
DUF2532
SLFN-g3_helicase
AAA_30
RPA43_OB
Motif
Other DBs
NCBI-GeneID:
119608314
NCBI-ProteinID:
XP_037818614
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
METKGVAHKLDAKERTDDVRLKELAPFSKMLLSEPVRKGLHAAGFMYPTVIQATAIPVGK
SGMDLLVQSKSGTGKTLIFSTIVLEFYRSDLREPQSLIVAPTREIAVQIEEILNEIGKYC
AGFRAVCVIGGMDVAEDRKRLQVAKCVVGTPGRILHLIQNEVLNTSQISLLVLDEADKMY
TQTFRQDLQRIRKALPNRKQTIACSATFVDNLDKELAKIMKNPLLISTEERATLLVGIKQ
FVYELPEQKTSILEMQLKLEALRHLFGRIAFKQCLIFAGSQSRADSYRNYLEKDGWPCEL
ISGAQDQKTRLENFRKFREFKTRILMATDLMARGVDSEHVNLVINLELPQDVVTYLHRIG
RAGRFGSHGLAISFVSSEKDHKTFKKLITEVGTGMKVFKFPSKDQTEKEPRDLWNFGEFA
EDAKYFGVYQSDMQKLLAPLASQDNITLSSSLSDNKENLTNNISSQQQSSIDTNTFLVNS
KDSALLVPNLSSEHFIAQKIAISPTSNNEALLNDLPPLGTPPPPPNPSENLNTAGESHNS
SSHHLLTSNTIDDASSIAADSLRSSQQDISRYQSVLMQKSAIPTLVEFLVDRHSSQDSQT
KENGEPCTKIDLFDAYTKEVLNNNESLTEPVITSDEPLLSSNKLAQLKSLLIDKPEEKSP
INEVQDLYSDFANFQEDDISTSVSEDIDKQTFILSVATPSVQQDSFSELQNNSSDLYPAT
DETNISTETPRGEKEHKHFPSPAHNQMPEFMPDILSGQMQKNKPQQQHQKLQQKLSINKT
AQIEIPPYQSPPNSVSPLVNALENNENNSTPSTERSSSDTAASPQEEVLDNSGSDVERSG
NTSGFDEKTSTSGSSGIESSEHNNATVGPQQIPLYYTSSEDDSYESDDEEEEEEEEEEEE
DDDDESEHYFNTDEEAAEEDDDDDEDNLVECFDNTMATNFPLNHTRTTTTRNHSSNSSNT
LTNATPDSLNLAYQSAYSRWVDLYWNQMTLVQDYVKFFQFTRQQQQQNE
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaaaggcgtcgcccataagttagatgccaaagaacgaactgacgatgtgcgt
cttaaagaattagcgcctttcagtaaaatgttgctttccgaaccagtgcgtaagggttta
catgcagccggctttatgtatcccacggtaatacaggccactgccataccagtgggtaaa
tcgggaatggatcttttggttcaatctaaatcgggcactggaaaaactttaattttttcc
accatcgtgctggaattctatcgcagtgacttgcgggaacctcaatcgctgattgtggct
cccactcgtgaaattgccgtgcaaattgaagaaattcttaatgaaattggtaaatattgt
gcggggttccgtgccgtttgtgtaattggtggtatggatgtggccgaagatcgtaaacgt
ttgcaggttgccaaatgtgtggtcggtactcccggcagaattttacatttaatacaaaat
gaggtattaaatacttcgcaaatatcgctgttggtcttggatgaggctgataaaatgtat
acacaaacttttcgccaagatttacagagaatacgcaaagctttgccgaatcgcaaacag
accatagcctgcagcgccacatttgtggataatttagataaggaattagctaaaattatg
aaaaatcctttgttgatatcgaccgaggagcgcgctactctcttggtgggaattaaacaa
tttgtgtatgaattacccgaacagaaaactagtattctggaaatgcagttgaaactggag
gccttaagacacttatttggcagaatagcttttaaacagtgcttaatatttgcgggatct
cagtcacgtgctgattcgtatcgcaattatttagaaaaggatggttggccttgtgaatta
atatcaggggctcaggatcaaaagacacgtttggaaaatttccgtaaatttcgtgaattc
aaaacgcgcatacttatggccaccgacttaatggctcgaggtgtggattcggaacatgta
aatttggttattaatcttgagctaccgcaagatgtggtgacttatcttcatagaataggt
cgagcaggacgttttggttctcatggtctagccataagttttgtgtcctcggaaaaagat
cataaaacatttaaaaaacttataacagaagttggcaccggcatgaaggtattcaaattt
ccttcaaaagaccaaaccgaaaaagaaccaagagatctatggaattttggagaatttgca
gaagatgccaaatactttggtgtctatcaaagtgatatgcagaaactattggctcctttg
gcctcacaagataatataacactttcatcctctttatctgataataaggaaaaccttaca
aataatatttcctcccagcaacaatcgtcgattgacaccaatacttttctagtcaattct
aaagatagtgctttactagtacccaacttgtctagtgaacattttattgctcaaaaaatc
gccataagtcctacttcaaataatgaggctctactcaatgacttgccgcccttaggcact
ccaccaccaccgccaaatccttcggaaaatcttaatacagctggtgaatctcataatagt
tcttcacatcatttattaacttcgaatacaattgatgatgctagtagcattgcggccgat
agtttgcgcagtagccaacaggatatttctcgttatcaatcggttttaatgcagaaatcg
gctatacctactttagtagagtttttggtcgatcgtcattcttcacaggattcacagaca
aaggaaaatggtgaaccatgtacgaaaattgatctgtttgatgcctataccaaggaggtt
ttaaataataatgaatctttgactgagcctgttataacctccgatgaacccttgttatcc
tctaataaattagctcaattgaaatctttacttatcgataaacccgaagaaaaatcaccc
atcaatgaagtacaagatttgtattccgattttgccaattttcaagaagatgacatttcg
acttctgtctccgaagatattgataaacaaacttttatactatcggtagctacaccttca
gtgcaacaggattcattttcagaattacaaaataattcttcagatttatatccagctaca
gatgaaacaaacataagcaccgaaacaccaagaggtgaaaaggaacacaaacattttccc
tcaccggcacacaatcaaatgccggaatttatgccagatattttgtcgggacaaatgcaa
aaaaataaaccacaacagcagcatcaaaagttacagcaaaagttatccattaataaaaca
gctcaaattgaaattccaccttatcaatctccacctaattccgtgtcacctttagtaaat
gctttggaaaataatgaaaataattcaacaccttctactgaaagatcttcatcggatact
gctgcttcgccacaagaagaagttttagataattctggctctgatgtagaacgtagtggt
aatacaagtggttttgatgaaaaaacctcaacttctggttcctcgggtatagaatcctct
gagcataataatgccacagtaggacctcaacaaattcccttgtactatacatccagtgaa
gatgattcatatgaaagtgatgacgaagaggaggaagaagaagaagaggaagaggaagaa
gacgatgatgatgaaagtgaacattattttaatacagatgaagaagctgcggaagaggat
gatgacgatgacgaggataatttagttgaatgttttgacaataccatggccacaaatttc
cctctaaaccatactagaactaccaccacccgtaatcacagcagcaactcatctaatact
ttaacaaatgctacaccagattctcttaatttagcctatcaatcggcttattcccgctgg
gtggatttatattggaatcaaatgactttggtacaagattatgttaaatttttccaattt
actagacaacaacagcaacaaaatgaatag
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