Lucilia sericata (common green bottle fly): 119608968
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Entry
119608968 CDS
T08270
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119608968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsq03019
]
119608968
Messenger RNA biogenesis [BR:
lsq03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119608968
mRNA degradation factors
3'-5' decay
Pan complex
119608968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
DUF4797
Pkinase
Motif
Other DBs
NCBI-GeneID:
119608968
NCBI-ProteinID:
XP_037819539
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MDPIFYSPSNGIPSESKLATYMNRQNVATPTYGINAGFSLLNMDSPLSIKKSQVTPQSPE
FIPTRISSSPNFYSPYHTPMLNGVTSVGNNVVNGLTPTSTAAKSVNGTPSMLGLQKATAA
AVAQQKQLQQQQQQKHNSHVNGGTKQIGQTSANQGGYVGMTTTPLKGGRNSLLRNESPSS
IGEKSPPRMTPHASPIPTTLPANVHQENVGGTIYFYPTANHTTSQNTNTVGVPSGVVDPT
SAHHAGPTGVGVGVMAPITPVQPSLMYTGHVYPGPASNVITMQPKTQLESAFFLPDEMRA
EILSRNVISNLMLDASEAAQHALPMEIDNYHTLYPLEALPVQPLHAKLTLPSSTYKATHS
TTGIKYCLRRLHGFRLQSTKCMTVVEMWKKLQHSNVVQLREVFTTKAFGDNSLVLVYDYH
PNSHTLLAKYFTPTPDSNGYNDPFQGEARPFSHKSNLQRSSNGPLLPEATIWSIIMQLTA
GLRAIHQAGLACKVLDPTKIIVTGKRVRFSFCGTSDIAQFDPNAANPLAVVSMHQQEDLT
ALGRLVLALACRCLQSVQRDNVQSSIEMVSRHYSSDLRNFIVYLFTTTQRRSVTDLMPMI
GARFYTQLDALQAQCDMQEDELAKEMENGRLYRILVKLNCINERPDFNLDCTWSEIGDRY
MLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSLERVQLMSRDEQSVLIVTYAELK
NCLEKAFSELMANAAT
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggatccaattttttactccccatcaaatggcataccttctgaaagtaaactagcaaca
tatatgaatcgacaaaatgttgcaacaccaacttacggtataaatgcgggattttcttta
cttaatatggactcaccattgtcgattaagaagtctcaggtaacaccacaatcgcccgaa
ttcattccaacacgtatcagttcatcacccaatttctattcgccatatcatactccaatg
ttaaatggtgtaacgtctgttggtaataacgtcgttaatggtctaacgcccacaagtaca
gcagctaaatcggttaatggtacaccctctatgttgggtctgcaaaaagcaacagccgct
gccgtggcacaacaaaagcaattacaacaacagcaacaacaaaaacacaatagccacgtt
aacggcggcacaaaacaaatcggacaaacgagcgccaatcaaggaggatacgtaggcatg
acaacgacaccgttaaaaggtggacgcaatagtttgctgcgcaacgaatcaccctcgagt
ataggtgagaaatcaccgccacgtatgacaccacacgcatcgcccatacccaccacatta
ccagccaatgtacatcaggaaaatgttggcggtaccatctacttttatccaactgccaat
catacgaccagccagaataccaacaccgtcggtgtacccagcggcgttgtcgatccaacg
tccgcccatcatgccggtcccacaggtgtgggcgtgggtgttatggcacccataacaccc
gtccaaccatcgctcatgtatacgggtcatgtgtatccgggtcctgcctcaaatgtcata
acaatgcaaccgaaaacacaactagaatcggcattctttctgcccgacgaaatgcgcgcc
gaaattttgtcgcgtaatgtgatctcgaatttaatgttagatgccagtgaagcagcacaa
cacgccctacccatggaaattgataattatcatacgttgtatccgttagaagcgttgccc
gtgcagccgctgcacgccaagttaactctgccctcttccacctataaggcaacacatagt
acaactggtatcaaatattgtctgagaaggttacatggtttccgtttacaatcgacaaaa
tgtatgacagtcgttgaaatgtggaaaaagttgcagcattcaaatgtggtacaattacgt
gaagtcttcacaacaaaagcatttggtgataattcattagtattagtttacgactatcat
ccaaactcacatacattattagcgaaatattttacaccaacgccagatagcaatggctat
aatgatccattccagggcgaggcacgccccttcagtcataagagcaatttacaacgttca
agcaatggtcctcttttacccgaagcaacaatttggtcaataattatgcaattaacagct
ggtttacgtgcaattcatcaagctggtttagcctgcaaagttttagatccaacaaaaata
attgtaaccggtaaacgtgtacgttttagtttttgtggcacaagtgatatcgcacagttt
gatccaaatgctgcaaatcctttggctgttgttagtatgcatcaacaggaggatttaaca
gcattgggtcgtttagtattagcattggcttgcagatgtttacagtcggtacagcgtgac
aatgtacaatcaagcattgaaatggtctcacgtcattactcctccgatttgagaaatttt
attgtttacttatttacaacgacacaaagacgttcggtgactgatttaatgccaatgatt
ggtgcacgtttttatacacaattggatgccttgcaagcacaatgtgatatgcaagaggat
gaacttgctaaagaaatggaaaatggacgtctttatagaatattggtgaaattaaattgt
attaacgagaggccagactttaatttggattgtacttggtctgaaattggtgatagatat
atgttaaaattattccgtgattatttatttcattccgtcactgaggatggtcgaccatgg
ttggatcacgcacatattgtacaatgtttaaataaattagatgctggctcattagaaaga
gttcaactaatgtcacgcgatgagcaatcggttcttattgttacttatgctgagctcaag
aattgcctggaaaaagcattttccgaattgatggccaatgctgccacataa
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integrated database retrieval system
