Lucilia sericata (common green bottle fly): 119610538
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Entry
119610538 CDS
T08270
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lsq
Lucilia sericata (common green bottle fly)
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsq03009
]
119610538
Enzymes [BR:
lsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119610538
Ribosome biogenesis [BR:
lsq03009
]
Eukaryotic type
Pre-60S particles
Helicases
119610538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
119610538
NCBI-ProteinID:
XP_037821725
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MSRKKWTALDKPPLSEPVLEVIQDMGFSLMTPVQTATIPLLLARKDVSAEAVTGSGKTLA
FLVPLLEMLQRRHKETPWLPKEIGALIISPTRELAIQISEVLARFLEHEELNHLRQKLIV
GGNSIDDDIKSLVKDGPCILVCTPGRLEDLFQRKGDLNLAARVKSLEFLVLDEADRLLDL
GFKATINNILAYLPRQRRTGLFSATQTTEVTDLIRAGLRNPVLVSVKEKSTINTPIRLQN
YYTLLEADEKFIALLHFLKSSKAKDSKVMVFFPTCACVEYWSEIIPQFLKDRSILGIHGK
MKNKRKNIIERFRKEDKSVLLCTDVLARGLDVPEIDWVIQWDPPSNAASFVHRVGRTARQ
GNEGNALVFLLPTEDAYVTFLKINQKVELEEMDDLGFDRNQLKPTLEKLHKLQASDKGLY
DKGVRAFVSHIQAYRKHECNAILRLKDMDMGKAATGYGLLQMPRMPELKTLNADNFIAPN
FEVDVNKLTYKNAQKEQARQEKVKTYEETGQWPGKKKHKKQTESWDQTKKAKMDVKTKKE
LRKAKKQRKKADEAANGAKGKKRKQQFTQEDLDELANDIRLFKRLKKNKISEEDFNKEMG
IDED
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcaaaaaatggactgctctagataaacctccattatctgaaccggttttagaa
gttatacaagatatgggctttagtttaatgacaccagtacagaccgccactataccctta
ttattggctcgtaaagatgtctccgctgaagctgttaccggttctggtaaaactttagct
ttcctagtgcctctattagaaatgctacagcgtcgccataaggaaaccccctggttacct
aaagaaattggtgctttaattatatcgcccacaagagaattagctatacagatatcagaa
gtattggcacgatttttggagcatgaagaattaaaccatttacggcagaaattaatagtg
ggtggcaatagtatagatgatgatatcaaatcattggtaaaagatggtccttgtatattg
gtctgcacaccaggcagattggaggatttatttcaacgtaaaggggatttgaatttggca
gcgagggtgaaaagtttggaatttttggttttggatgaagctgatcgtttattggatttg
ggcttcaaagccaccataaataatattttagcctatttaccgcgtcaaagacgtactgga
ctattttcagccactcaaacaactgaagtaacagatcttataagagctggtctccgtaat
ccggttttggtgtcggtgaaagagaaatcgaccattaatacacctattcgtttacaaaac
tactatactttactagaggccgatgagaaatttatagctttattacattttctcaagtct
agtaaagctaaagatagcaaagttatggttttctttcccacctgtgcctgtgttgaatac
tggtcggaaattataccgcaatttctaaaagatcgttccattttgggtatacatggaaaa
atgaaaaataaacgtaaaaatattatagaacgttttcgtaaagaagataaatcggtattg
ttgtgtacagatgtgttggccagaggtttagatgtgcccgaaattgactgggttatacag
tgggatcctccctcgaatgctgccagttttgtgcatcgtgtgggacgtactgcccgtcag
ggtaatgagggcaatgccttggtatttcttttacccaccgaagatgcttatgtgacattt
ttgaaaatcaaccaaaaagtggagttagaagaaatggatgatttaggttttgataggaat
caactaaaacccaccctggaaaaattacataaattacaagcctccgataagggtttgtat
gacaagggtgtcagagctttcgtctcgcacatacaagcctatagaaaacatgaatgtaat
gctattttaagattgaaagatatggacatgggcaaagctgccacgggttatggtcttcta
caaatgccccgtatgcctgagttaaaaaccctaaatgccgataatttcatagcccccaac
tttgaagttgatgtcaataagttaacctataaaaatgcccaaaaagaacaggctagacag
gaaaaagtgaaaacctacgaagagacaggacagtggccgggcaaaaagaaacataaaaaa
caaactgaatcttgggaccaaacgaaaaaggcaaaaatggatgttaaaaccaaaaaagaa
ctgagaaaagctaaaaaacaacgcaaaaaagcagatgaagctgccaatggcgcgaaggga
aagaaacgtaaacagcaattcacccaagaagatctcgatgagttggccaatgatatacgt
ttgtttaagagattgaaaaagaacaaaattagtgaggaagattttaataaagaaatgggt
atagatgaggattaa
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