Lucilia sericata (common green bottle fly): 119611676
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Entry
119611676 CDS
T08270
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119611676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsq03021
]
119611676
03019 Messenger RNA biogenesis [BR:
lsq03019
]
119611676
Transcription machinery [BR:
lsq03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119611676
Messenger RNA biogenesis [BR:
lsq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119611676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCHC
zf-CCCH_3
Torus
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_RBM22
Nab2-like_zf-CCCH_
zf-CCHC_3
zf-CCCH_2
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
119611676
NCBI-ProteinID:
XP_037823266
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MDMILANVNNIYFKVEKDLTEQVGAISLPFFGMDKSVAAVCQFLNSKNGVECSKGVMCPF
RHIRGDRTIVCKHWLRGLCKKGDQCEFLHEFDMKKMPECYFYSRFNACHNKECPFLHIDP
ESKIKDCPWYDRGFCRHGPHCRHRHVRRVLCMNYLAGFCPNGWNCKHMHPRFELPPSADL
SKETFQKKIPTCHFCGEFGHKASVCKKNPESNADQIPTKPASNARYQNYCGPNNSGQPNN
QHKDTQENLSNDAGNEENSETTSSTNTTNSNGPPYPKVSKPLDEITCYKCGNKGHYANKC
PKGHLAFLSNHRSHK
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggatatgatattagcaaatgttaataatatctactttaaagtagaaaaagatctaaca
gaacaagtgggtgccatatcattgccattttttggcatggacaagtcggtggcagcagtt
tgtcaatttctaaactctaagaatggagtggaatgtagcaaaggagtgatgtgtccattt
cgacatatacggggagatcgaactatagtctgtaagcattggttgcgtggcctatgcaag
aaaggagaccaatgtgaatttttacatgaattcgatatgaaaaagatgcccgagtgttat
ttttactctcgttttaatgcatgtcataacaaggaatgtccctttttgcatatcgaccct
gaaagtaaaattaaggactgtccctggtacgaccgaggattttgtcgccatggtcctcac
tgtcgtcatcgtcacgtaagaagagttttgtgtatgaattatttggccggcttctgtcca
aacggttggaactgtaaacatatgcacccacgttttgagctacccccaagtgctgaccta
agcaaggaaacgttccagaagaaaatacctacatgccatttttgtggagaatttggacat
aaggcatccgtatgtaaaaagaatcccgaaagtaatgcagaccaaataccaacgaagccg
gcatctaatgctcgttatcagaattattgtggtccgaataattcgggtcaaccaaataat
caacataaagatacccaagaaaatcttagcaatgatgctggcaatgaagaaaattccgag
acaacttcaagtactaatactactaatagcaatgggccaccataccctaaggtatctaaa
ccattagatgaaatcacctgttacaaatgcggtaacaaaggacattatgctaataaatgt
cctaaaggccacttagcttttctttctaatcatcgtagccacaaatga
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integrated database retrieval system
